Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 PKD1P6-201ENST00000343738 4769 ntBASIC19.36■□□□□ 0.69
RTL6Q6ICC9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 RAP2CP1-201ENST00000605103 478 ntBASIC19.35■□□□□ 0.69
RTL6Q6ICC9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL6Q6ICC9 C9orf163-202ENST00000624034 2573 ntBASIC19.35■□□□□ 0.69
RTL6Q6ICC9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 KRT19P1-201ENST00000405746 1186 ntBASIC19.34■□□□□ 0.69
RTL6Q6ICC9 CDCA4P2-201ENST00000441182 718 ntBASIC19.34■□□□□ 0.69
RTL6Q6ICC9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL6Q6ICC9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL6Q6ICC9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL6Q6ICC9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RTL6Q6ICC9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL6Q6ICC9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL6Q6ICC9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 AC079140.4-201ENST00000507448 529 ntBASIC19.33■□□□□ 0.68
RTL6Q6ICC9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 AC073111.5-205ENST00000641717 521 ntBASIC19.33■□□□□ 0.68
RTL6Q6ICC9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL6Q6ICC9 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.32■□□□□ 0.68
RTL6Q6ICC9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 AC233723.2-201ENST00000623798 2106 ntBASIC19.32■□□□□ 0.68
RTL6Q6ICC9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 AC005224.4-201ENST00000583262 1652 ntBASIC19.32■□□□□ 0.68
RTL6Q6ICC9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL6Q6ICC9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL6Q6ICC9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms