Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.89■■□□□ 1.58
KRT40Q6A162 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.89■■□□□ 1.58
KRT40Q6A162 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.89■■□□□ 1.58
KRT40Q6A162 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
KRT40Q6A162 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KRT40Q6A162 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.89■■□□□ 1.58
KRT40Q6A162 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.89■■□□□ 1.58
KRT40Q6A162 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.89■■□□□ 1.58
KRT40Q6A162 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.89■■□□□ 1.58
KRT40Q6A162 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
KRT40Q6A162 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 RASA4CP-201ENST00000424092 1398 ntBASIC24.89■■□□□ 1.57
KRT40Q6A162 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.89■■□□□ 1.57
KRT40Q6A162 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
KRT40Q6A162 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.88■■□□□ 1.57
KRT40Q6A162 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
KRT40Q6A162 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KRT40Q6A162 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.88■■□□□ 1.57
KRT40Q6A162 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.88■■□□□ 1.57
KRT40Q6A162 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KRT40Q6A162 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KRT40Q6A162 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KRT40Q6A162 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 AC126544.1-201ENST00000580842 1059 ntBASIC24.87■■□□□ 1.57
KRT40Q6A162 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.87■■□□□ 1.57
KRT40Q6A162 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.87■■□□□ 1.57
KRT40Q6A162 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KRT40Q6A162 AC026471.6-201ENST00000622954 1905 ntBASIC24.86■■□□□ 1.57
KRT40Q6A162 IRS3P-201ENST00000223076 1006 ntBASIC24.86■■□□□ 1.57
KRT40Q6A162 AC099791.1-201ENST00000416440 715 ntBASIC24.86■■□□□ 1.57
KRT40Q6A162 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.86■■□□□ 1.57
KRT40Q6A162 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.86■■□□□ 1.57
KRT40Q6A162 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.86■■□□□ 1.57
KRT40Q6A162 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KRT40Q6A162 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KRT40Q6A162 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KRT40Q6A162 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
KRT40Q6A162 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.86■■□□□ 1.57
KRT40Q6A162 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
KRT40Q6A162 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.86■■□□□ 1.57
KRT40Q6A162 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KRT40Q6A162 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KRT40Q6A162 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KRT40Q6A162 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.85■■□□□ 1.57
KRT40Q6A162 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
KRT40Q6A162 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.85■■□□□ 1.57
KRT40Q6A162 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
KRT40Q6A162 CLDN5-201ENST00000403084 2357 ntBASIC24.85■■□□□ 1.57
KRT40Q6A162 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
KRT40Q6A162 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.84■■□□□ 1.57
KRT40Q6A162 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.84■■□□□ 1.57
KRT40Q6A162 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.84■■□□□ 1.57
KRT40Q6A162 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.84■■□□□ 1.57
KRT40Q6A162 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.84■■□□□ 1.57
KRT40Q6A162 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.84■■□□□ 1.57
KRT40Q6A162 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KRT40Q6A162 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.83■■□□□ 1.57
KRT40Q6A162 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.83■■□□□ 1.57
KRT40Q6A162 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.83■■□□□ 1.57
KRT40Q6A162 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.83■■□□□ 1.57
KRT40Q6A162 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 IGHV3-19-201ENST00000521488 291 ntBASIC24.83■■□□□ 1.57
KRT40Q6A162 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.83■■□□□ 1.57
KRT40Q6A162 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.83■■□□□ 1.57
KRT40Q6A162 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.83■■□□□ 1.57
KRT40Q6A162 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
KRT40Q6A162 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
KRT40Q6A162 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
KRT40Q6A162 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.82■■□□□ 1.56
KRT40Q6A162 AC027682.1-201ENST00000562846 899 ntBASIC24.82■■□□□ 1.56
KRT40Q6A162 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
KRT40Q6A162 AC022517.1-201ENST00000592429 346 ntBASIC24.82■■□□□ 1.56
KRT40Q6A162 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.82■■□□□ 1.56
KRT40Q6A162 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
KRT40Q6A162 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
KRT40Q6A162 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms