Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.81■■□□□ 1.24
VARS2Q5ST30 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.81■■□□□ 1.24
VARS2Q5ST30 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
VARS2Q5ST30 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VARS2Q5ST30 UBE2DNL-204ENST00000602536 740 ntBASIC22.81■■□□□ 1.24
VARS2Q5ST30 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.81■■□□□ 1.24
VARS2Q5ST30 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.81■■□□□ 1.24
VARS2Q5ST30 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VARS2Q5ST30 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VARS2Q5ST30 AP006587.3-201ENST00000525742 1516 ntBASIC22.81■■□□□ 1.24
VARS2Q5ST30 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VARS2Q5ST30 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
VARS2Q5ST30 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VARS2Q5ST30 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VARS2Q5ST30 CROCCP5-201ENST00000436658 830 ntBASIC22.8■■□□□ 1.24
VARS2Q5ST30 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VARS2Q5ST30 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VARS2Q5ST30 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
VARS2Q5ST30 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
VARS2Q5ST30 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.79■■□□□ 1.24
VARS2Q5ST30 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
VARS2Q5ST30 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.79■■□□□ 1.24
VARS2Q5ST30 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
VARS2Q5ST30 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VARS2Q5ST30 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VARS2Q5ST30 AC139530.1-201ENST00000575312 1977 ntBASIC22.78■■□□□ 1.24
VARS2Q5ST30 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VARS2Q5ST30 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.78■■□□□ 1.24
VARS2Q5ST30 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VARS2Q5ST30 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 AC006970.2-201ENST00000450065 779 ntBASIC22.77■■□□□ 1.24
VARS2Q5ST30 AC010141.2-201ENST00000452426 721 ntBASIC22.77■■□□□ 1.24
VARS2Q5ST30 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 AC138907.5-202ENST00000569484 235 ntBASIC22.77■■□□□ 1.24
VARS2Q5ST30 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.77■■□□□ 1.24
VARS2Q5ST30 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
VARS2Q5ST30 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.76■■□□□ 1.23
VARS2Q5ST30 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 MYCNOS-205ENST00000641950 531 ntBASIC22.76■■□□□ 1.23
VARS2Q5ST30 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
VARS2Q5ST30 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.76■■□□□ 1.23
VARS2Q5ST30 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
VARS2Q5ST30 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.76■■□□□ 1.23
VARS2Q5ST30 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VARS2Q5ST30 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.75■■□□□ 1.23
VARS2Q5ST30 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.75■■□□□ 1.23
VARS2Q5ST30 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VARS2Q5ST30 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms