Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 AC144652.1-201ENST00000609974 1624 ntBASIC20.91■□□□□ 0.94
SFT2D3Q587I9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D3Q587I9 FP325331.1-202ENST00000623531 1380 ntBASIC20.91■□□□□ 0.94
SFT2D3Q587I9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.9■□□□□ 0.94
SFT2D3Q587I9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 AC142381.2-201ENST00000566120 298 ntBASIC20.9■□□□□ 0.94
SFT2D3Q587I9 AL031432.3-201ENST00000607698 485 ntBASIC20.9■□□□□ 0.94
SFT2D3Q587I9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.9■□□□□ 0.94
SFT2D3Q587I9 AL355001.2-201ENST00000620617 1191 ntBASIC20.9■□□□□ 0.94
SFT2D3Q587I9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D3Q587I9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
SFT2D3Q587I9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.89■□□□□ 0.93
SFT2D3Q587I9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
SFT2D3Q587I9 AL157384.1-201ENST00000445995 2473 ntBASIC20.89■□□□□ 0.93
SFT2D3Q587I9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SFT2D3Q587I9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SFT2D3Q587I9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.89■□□□□ 0.93
SFT2D3Q587I9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 AC136469.2-201ENST00000623944 1028 ntBASIC20.88■□□□□ 0.93
SFT2D3Q587I9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SFT2D3Q587I9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 LINC01529-204ENST00000636474 1715 ntBASIC20.87■□□□□ 0.93
SFT2D3Q587I9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 SUDS3P1-201ENST00000505831 966 ntBASIC20.87■□□□□ 0.93
SFT2D3Q587I9 DUX4L4-201ENST00000566884 1269 ntBASIC20.87■□□□□ 0.93
SFT2D3Q587I9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
SFT2D3Q587I9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 AF213884.3-201ENST00000563833 479 ntBASIC20.86■□□□□ 0.93
SFT2D3Q587I9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D3Q587I9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SFT2D3Q587I9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms