Protein–RNA interactions for Protein: Q3LHN1

KRTAP21-3, Keratin-associated protein 21-3, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP21-3Q3LHN1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 DUX4L26-201ENST00000489078 1255 ntBASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 AC105020.6-201ENST00000621523 1217 ntBASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
KRTAP21-3Q3LHN1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 AL450487.1-201ENST00000426799 995 ntBASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 AC010141.3-201ENST00000456659 717 ntBASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP21-3Q3LHN1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 AC233263.1-201ENST00000578059 224 ntBASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 AP004609.3-201ENST00000610705 1884 ntBASIC17.1■□□□□ 0.33
KRTAP21-3Q3LHN1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 LSM12P1-201ENST00000411836 588 ntBASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 AC133681.1-201ENST00000465482 601 ntBASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRTAP21-3Q3LHN1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
KRTAP21-3Q3LHN1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 PNMA6B-201ENST00000538162 1200 ntBASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 MIR6786-201ENST00000616843 113 ntBASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRTAP21-3Q3LHN1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP21-3Q3LHN1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms