Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 RTT109YLL002W 1311 nt3.29□□□□□ -1.88
CLP1Q08685 NKP1YDR383C 717 nt3.29□□□□□ -1.88
CLP1Q08685 YGL118CYGL118C 438 nt3.29□□□□□ -1.88
CLP1Q08685 AIM25YJR100C 984 nt3.29□□□□□ -1.88
CLP1Q08685 SWD2YKL018W 990 nt3.29□□□□□ -1.88
CLP1Q08685 ERD2YBL040C 660 nt3.29□□□□□ -1.88
CLP1Q08685 TAF14YPL129W 735 nt3.29□□□□□ -1.88
CLP1Q08685 SUI3YPL237W 858 nt3.29□□□□□ -1.88
CLP1Q08685 PHO88YBR106W 567 nt3.29□□□□□ -1.88
CLP1Q08685 SKP2YNL311C 2292 nt3.29□□□□□ -1.88
CLP1Q08685 RRP5YMR229C 5190 nt3.29□□□□□ -1.88
CLP1Q08685 YTA7YGR270W 4140 nt3.29□□□□□ -1.88
CLP1Q08685 RPA135YPR010C 3612 nt3.29□□□□□ -1.88
CLP1Q08685 VPS17YOR132W 1656 nt3.29□□□□□ -1.88
CLP1Q08685 NUP60YAR002W 1620 nt3.29□□□□□ -1.88
CLP1Q08685 PTM1YKL039W 1572 nt3.29□□□□□ -1.88
CLP1Q08685 ALG8YOR067C 1734 nt3.28□□□□□ -1.88
CLP1Q08685 COS7YDL248W 1152 nt3.28□□□□□ -1.88
CLP1Q08685 RPC11YDR045C 333 nt3.28□□□□□ -1.88
CLP1Q08685 YPR1YDR368W 939 nt3.28□□□□□ -1.88
CLP1Q08685 DYN2YDR424C 279 nt3.28□□□□□ -1.88
CLP1Q08685 COS5YJR161C 1152 nt3.28□□□□□ -1.88
CLP1Q08685 AHP1YLR109W 531 nt3.28□□□□□ -1.88
CLP1Q08685 SEC65YML105C 822 nt3.28□□□□□ -1.88
CLP1Q08685 RLP7YNL002C 969 nt3.28□□□□□ -1.88
CLP1Q08685 RAS1YOR101W 930 nt3.28□□□□□ -1.88
CLP1Q08685 NIP7YPL211W 546 nt3.28□□□□□ -1.88
CLP1Q08685 YPR015CYPR015C 744 nt3.28□□□□□ -1.88
CLP1Q08685 SPA2YLL021W 4401 nt3.28□□□□□ -1.88
CLP1Q08685 THR4YCR053W 1545 nt3.28□□□□□ -1.88
CLP1Q08685 FBP26YJL155C 1359 nt3.27□□□□□ -1.89
CLP1Q08685 NDT80YHR124W 1884 nt3.27□□□□□ -1.89
CLP1Q08685 snR57snR57 88 nt3.27□□□□□ -1.89
CLP1Q08685 YCR101CYCR101C 549 nt3.27□□□□□ -1.89
CLP1Q08685 BUR6YER159C 429 nt3.27□□□□□ -1.89
CLP1Q08685 RPL1BYGL135W 654 nt3.27□□□□□ -1.89
CLP1Q08685 SPC24YMR117C 642 nt3.27□□□□□ -1.89
CLP1Q08685 TPM1YNL079C 600 nt3.27□□□□□ -1.89
CLP1Q08685 SSU72YNL222W 621 nt3.27□□□□□ -1.89
CLP1Q08685 TUM1YOR251C 915 nt3.27□□□□□ -1.89
CLP1Q08685 RPL1AYPL220W 654 nt3.27□□□□□ -1.89
CLP1Q08685 TRM1YDR120C 1713 nt3.27□□□□□ -1.89
CLP1Q08685 PUF6YDR496C 1971 nt3.27□□□□□ -1.89
CLP1Q08685 GAT2YMR136W 1683 nt3.27□□□□□ -1.89
CLP1Q08685 YMR317WYMR317W 3423 nt3.26□□□□□ -1.89
CLP1Q08685 FRE2YKL220C 2136 nt3.26□□□□□ -1.89
CLP1Q08685 DUF1YOL087C 3351 nt3.26□□□□□ -1.89
CLP1Q08685 YIG1YPL201C 1386 nt3.26□□□□□ -1.89
CLP1Q08685 PSK1YAL017W 4071 nt3.26□□□□□ -1.89
CLP1Q08685 MYO5YMR109W 3660 nt3.26□□□□□ -1.89
CLP1Q08685 PCL9YDL179W 915 nt3.26□□□□□ -1.89
CLP1Q08685 ARD1YHR013C 717 nt3.26□□□□□ -1.89
CLP1Q08685 SDO1YLR022C 753 nt3.26□□□□□ -1.89
CLP1Q08685 MDJ2YNL328C 441 nt3.26□□□□□ -1.89
CLP1Q08685 CAT5YOR125C 702 nt3.26□□□□□ -1.89
CLP1Q08685 RPA43YOR340C 981 nt3.26□□□□□ -1.89
CLP1Q08685 TOM70YNL121C 1854 nt3.25□□□□□ -1.89
CLP1Q08685 DTD1YDL219W 453 nt3.25□□□□□ -1.89
CLP1Q08685 YGR107WYGR107W 450 nt3.25□□□□□ -1.89
CLP1Q08685 IME1YJR094C 1083 nt3.25□□□□□ -1.89
CLP1Q08685 RPS31YLR167W 459 nt3.25□□□□□ -1.89
CLP1Q08685 SSN8YNL025C 972 nt3.25□□□□□ -1.89
CLP1Q08685 INN1YNL152W 1230 nt3.25□□□□□ -1.89
CLP1Q08685 NTO1YPR031W 2247 nt3.25□□□□□ -1.89
CLP1Q08685 RSN1YMR266W 2862 nt3.24□□□□□ -1.89
CLP1Q08685 GRX6YDL010W 696 nt3.24□□□□□ -1.89
CLP1Q08685 FCF1YDR339C 570 nt3.24□□□□□ -1.89
CLP1Q08685 LSM6YDR378C 261 nt3.24□□□□□ -1.89
CLP1Q08685 ENT3YJR125C 1227 nt3.24□□□□□ -1.89
CLP1Q08685 YNL320WYNL320W 855 nt3.24□□□□□ -1.89
CLP1Q08685 snR42snR42 351 nt3.24□□□□□ -1.89
CLP1Q08685 MSM1YGR171C 1728 nt3.24□□□□□ -1.89
CLP1Q08685 STE6YKL209C 3873 nt3.23□□□□□ -1.89
CLP1Q08685 UTP6YDR449C 1323 nt3.23□□□□□ -1.89
CLP1Q08685 YDL162CYDL162C 357 nt3.23□□□□□ -1.89
CLP1Q08685 BMH2YDR099W 822 nt3.23□□□□□ -1.89
CLP1Q08685 GCD14YJL125C 1152 nt3.23□□□□□ -1.89
CLP1Q08685 APC9YLR102C 798 nt3.23□□□□□ -1.89
CLP1Q08685 PBA1YLR199C 831 nt3.23□□□□□ -1.89
CLP1Q08685 RAD33YML011C 534 nt3.23□□□□□ -1.89
CLP1Q08685 HHF1YBR009C 312 nt3.23□□□□□ -1.89
CLP1Q08685 REC8YPR007C 2043 nt3.23□□□□□ -1.89
CLP1Q08685 HPA2YPR193C 471 nt3.23□□□□□ -1.89
CLP1Q08685 snR34snR34 203 nt3.23□□□□□ -1.89
CLP1Q08685 YBR242WYBR242W 717 nt3.23□□□□□ -1.89
CLP1Q08685 RAX2YLR084C 3663 nt3.23□□□□□ -1.89
CLP1Q08685 SIN3YOL004W 4611 nt3.23□□□□□ -1.89
CLP1Q08685 CHO2YGR157W 2610 nt3.23□□□□□ -1.89
CLP1Q08685 PKH1YDR490C 2301 nt3.22□□□□□ -1.89
CLP1Q08685 KRE2YDR483W 1329 nt3.22□□□□□ -1.89
CLP1Q08685 FAP7YDL166C 594 nt3.22□□□□□ -1.89
CLP1Q08685 MRPS35YGR165W 1038 nt3.22□□□□□ -1.89
CLP1Q08685 MSA2YKR077W 1092 nt3.22□□□□□ -1.89
CLP1Q08685 YOL050CYOL050C 321 nt3.22□□□□□ -1.89
CLP1Q08685 TIM12YBR091C 330 nt3.22□□□□□ -1.89
CLP1Q08685 HRD1YOL013C 1656 nt3.22□□□□□ -1.89
CLP1Q08685 MSH2YOL090W 2895 nt3.22□□□□□ -1.89
CLP1Q08685 YHR080CYHR080C 4038 nt3.22□□□□□ -1.89
CLP1Q08685 FLO1YAR050W 4614 nt3.22□□□□□ -1.89
CLP1Q08685 PDC2YDR081C 2778 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms