Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-1P78426 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.84■□□□□ 0.61
NKX6-1P78426 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-1P78426 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NKX6-1P78426 DUSP8P5-201ENST00000422884 1815 ntBASIC18.84■□□□□ 0.61
NKX6-1P78426 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
NKX6-1P78426 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-1P78426 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.83■□□□□ 0.61
NKX6-1P78426 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.83■□□□□ 0.61
NKX6-1P78426 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.83■□□□□ 0.61
NKX6-1P78426 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-1P78426 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.83■□□□□ 0.6
NKX6-1P78426 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.83■□□□□ 0.6
NKX6-1P78426 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.83■□□□□ 0.6
NKX6-1P78426 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.83■□□□□ 0.6
NKX6-1P78426 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.83■□□□□ 0.6
NKX6-1P78426 AC087239.1-201ENST00000622671 572 ntBASIC18.83■□□□□ 0.6
NKX6-1P78426 AC105233.4-201ENST00000642045 216 ntBASIC18.83■□□□□ 0.6
NKX6-1P78426 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
NKX6-1P78426 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-1P78426 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.83■□□□□ 0.6
NKX6-1P78426 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NKX6-1P78426 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 AC006015.1-201ENST00000429970 570 ntBASIC18.82■□□□□ 0.6
NKX6-1P78426 AC010141.3-201ENST00000456659 717 ntBASIC18.82■□□□□ 0.6
NKX6-1P78426 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX6-1P78426 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX6-1P78426 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.82■□□□□ 0.6
NKX6-1P78426 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
NKX6-1P78426 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NKX6-1P78426 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX6-1P78426 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-1P78426 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
NKX6-1P78426 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX6-1P78426 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.81■□□□□ 0.6
NKX6-1P78426 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 AC073111.5-205ENST00000641717 521 ntBASIC18.81■□□□□ 0.6
NKX6-1P78426 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.81■□□□□ 0.6
NKX6-1P78426 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX6-1P78426 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX6-1P78426 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-1P78426 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NKX6-1P78426 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX6-1P78426 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX6-1P78426 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX6-1P78426 CDCA4P2-201ENST00000441182 718 ntBASIC18.8■□□□□ 0.6
NKX6-1P78426 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.8■□□□□ 0.6
NKX6-1P78426 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX6-1P78426 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.8■□□□□ 0.6
NKX6-1P78426 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX6-1P78426 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-1P78426 LINC01960-201ENST00000563759 1884 ntBASIC18.8■□□□□ 0.6
NKX6-1P78426 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NKX6-1P78426 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX6-1P78426 AC026185.1-201ENST00000445748 174 ntBASIC18.79■□□□□ 0.6
NKX6-1P78426 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.79■□□□□ 0.6
NKX6-1P78426 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.79■□□□□ 0.6
NKX6-1P78426 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.79■□□□□ 0.6
NKX6-1P78426 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX6-1P78426 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-1P78426 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-1P78426 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.78■□□□□ 0.6
NKX6-1P78426 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-1P78426 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-1P78426 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.78■□□□□ 0.6
NKX6-1P78426 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.78■□□□□ 0.6
NKX6-1P78426 RAP2CP1-201ENST00000605103 478 ntBASIC18.78■□□□□ 0.6
NKX6-1P78426 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.78■□□□□ 0.6
NKX6-1P78426 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms