Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAE1P78406 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RAE1P78406 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAE1P78406 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAE1P78406 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAE1P78406 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.43■□□□□ 0.86
RAE1P78406 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.43■□□□□ 0.86
RAE1P78406 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
RAE1P78406 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAE1P78406 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.43■□□□□ 0.86
RAE1P78406 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
RAE1P78406 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAE1P78406 AP004607.7-201ENST00000527152 1677 ntBASIC20.42■□□□□ 0.86
RAE1P78406 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.42■□□□□ 0.86
RAE1P78406 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAE1P78406 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.42■□□□□ 0.86
RAE1P78406 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.42■□□□□ 0.86
RAE1P78406 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.42■□□□□ 0.86
RAE1P78406 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.42■□□□□ 0.86
RAE1P78406 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RAE1P78406 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAE1P78406 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.42■□□□□ 0.86
RAE1P78406 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAE1P78406 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAE1P78406 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAE1P78406 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.41■□□□□ 0.86
RAE1P78406 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.41■□□□□ 0.86
RAE1P78406 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.41■□□□□ 0.86
RAE1P78406 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAE1P78406 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAE1P78406 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAE1P78406 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAE1P78406 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.41■□□□□ 0.86
RAE1P78406 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.41■□□□□ 0.86
RAE1P78406 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.41■□□□□ 0.86
RAE1P78406 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.41■□□□□ 0.86
RAE1P78406 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAE1P78406 PBX2P1-201ENST00000493219 1291 ntBASIC20.4■□□□□ 0.86
RAE1P78406 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.4■□□□□ 0.86
RAE1P78406 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.4■□□□□ 0.86
RAE1P78406 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.4■□□□□ 0.86
RAE1P78406 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RAE1P78406 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.4■□□□□ 0.86
RAE1P78406 SMUG1P1-201ENST00000590640 811 ntBASIC20.4■□□□□ 0.86
RAE1P78406 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 AC106739.1-201ENST00000617035 715 ntBASIC20.4■□□□□ 0.86
RAE1P78406 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.4■□□□□ 0.86
RAE1P78406 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RAE1P78406 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAE1P78406 Z98882.1-201ENST00000622160 2253 ntBASIC20.39■□□□□ 0.86
RAE1P78406 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAE1P78406 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAE1P78406 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RAE1P78406 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RAE1P78406 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAE1P78406 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.39■□□□□ 0.85
RAE1P78406 AL034346.1-201ENST00000568244 1277 ntBASIC20.39■□□□□ 0.85
RAE1P78406 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.39■□□□□ 0.85
RAE1P78406 AC008764.7-201ENST00000593779 1081 ntBASIC20.39■□□□□ 0.85
RAE1P78406 AC110285.6-201ENST00000617652 491 ntBASIC20.39■□□□□ 0.85
RAE1P78406 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RAE1P78406 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAE1P78406 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RAE1P78406 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.38■□□□□ 0.85
RAE1P78406 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RAE1P78406 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.38■□□□□ 0.85
RAE1P78406 AC126544.1-201ENST00000580842 1059 ntBASIC20.38■□□□□ 0.85
RAE1P78406 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
RAE1P78406 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.38■□□□□ 0.85
RAE1P78406 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAE1P78406 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAE1P78406 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.37■□□□□ 0.85
RAE1P78406 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.37■□□□□ 0.85
RAE1P78406 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.37■□□□□ 0.85
RAE1P78406 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAE1P78406 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.37■□□□□ 0.85
RAE1P78406 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms