Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB1AP62820 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB1AP62820 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB1AP62820 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB1AP62820 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB1AP62820 ECEL1P1-201ENST00000373592 1742 ntBASIC18.83■□□□□ 0.6
RAB1AP62820 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB1AP62820 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RAB1AP62820 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB1AP62820 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB1AP62820 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB1AP62820 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB1AP62820 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB1AP62820 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RAB1AP62820 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB1AP62820 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB1AP62820 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB1AP62820 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1AP62820 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB1AP62820 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RAB1AP62820 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAB1AP62820 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB1AP62820 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB1AP62820 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1AP62820 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB1AP62820 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
RAB1AP62820 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB1AP62820 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB1AP62820 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 AC092053.2-201ENST00000640557 1818 ntBASIC18.81■□□□□ 0.6
RAB1AP62820 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB1AP62820 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1AP62820 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 AP004607.7-201ENST00000527152 1677 ntBASIC18.8■□□□□ 0.6
RAB1AP62820 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB1AP62820 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.8■□□□□ 0.6
RAB1AP62820 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAB1AP62820 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB1AP62820 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB1AP62820 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB1AP62820 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1AP62820 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB1AP62820 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB1AP62820 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB1AP62820 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB1AP62820 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB1AP62820 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB1AP62820 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RAB1AP62820 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1AP62820 BX005040.4-201ENST00000637145 1518 ntBASIC18.79■□□□□ 0.6
RAB1AP62820 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB1AP62820 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB1AP62820 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms