Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC027682.1-201ENST00000562846 899 ntBASIC18.88■□□□□ 0.61
LSM6P62312 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.88■□□□□ 0.61
LSM6P62312 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LSM6P62312 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LSM6P62312 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM6P62312 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM6P62312 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
LSM6P62312 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM6P62312 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
LSM6P62312 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM6P62312 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM6P62312 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM6P62312 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LSM6P62312 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 AC244015.2-201ENST00000616358 1861 ntBASIC18.86■□□□□ 0.61
LSM6P62312 AP004607.7-201ENST00000527152 1677 ntBASIC18.86■□□□□ 0.61
LSM6P62312 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM6P62312 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM6P62312 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM6P62312 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.86■□□□□ 0.61
LSM6P62312 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.86■□□□□ 0.61
LSM6P62312 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM6P62312 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM6P62312 AC008764.7-201ENST00000593779 1081 ntBASIC18.86■□□□□ 0.61
LSM6P62312 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.86■□□□□ 0.61
LSM6P62312 AL355001.2-201ENST00000620617 1191 ntBASIC18.86■□□□□ 0.61
LSM6P62312 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM6P62312 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM6P62312 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LSM6P62312 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.86■□□□□ 0.61
LSM6P62312 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LSM6P62312 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LSM6P62312 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM6P62312 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LSM6P62312 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM6P62312 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM6P62312 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM6P62312 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM6P62312 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM6P62312 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.85■□□□□ 0.61
LSM6P62312 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM6P62312 AC110285.6-201ENST00000617652 491 ntBASIC18.85■□□□□ 0.61
LSM6P62312 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM6P62312 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM6P62312 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 AL024507.2-201ENST00000606070 2574 ntBASIC18.84■□□□□ 0.61
LSM6P62312 AC099791.1-201ENST00000416440 715 ntBASIC18.84■□□□□ 0.61
LSM6P62312 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
LSM6P62312 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LSM6P62312 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM6P62312 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LSM6P62312 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM6P62312 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.83■□□□□ 0.61
LSM6P62312 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LSM6P62312 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.83■□□□□ 0.6
LSM6P62312 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LSM6P62312 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM6P62312 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.83■□□□□ 0.6
LSM6P62312 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LSM6P62312 SMUG1P1-201ENST00000590640 811 ntBASIC18.83■□□□□ 0.6
LSM6P62312 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM6P62312 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.83■□□□□ 0.6
LSM6P62312 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM6P62312 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LSM6P62312 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms