Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC142381.2-201ENST00000566120 298 ntBASIC18.67■□□□□ 0.58
SEC61A1P61619 AC139530.1-201ENST00000575312 1977 ntBASIC18.67■□□□□ 0.58
SEC61A1P61619 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A1P61619 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A1P61619 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.67■□□□□ 0.58
SEC61A1P61619 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.67■□□□□ 0.58
SEC61A1P61619 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.66■□□□□ 0.58
SEC61A1P61619 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SEC61A1P61619 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC61A1P61619 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.66■□□□□ 0.58
SEC61A1P61619 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A1P61619 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
SEC61A1P61619 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SEC61A1P61619 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.65■□□□□ 0.58
SEC61A1P61619 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 EDA-201ENST00000338901 1233 ntBASIC18.65■□□□□ 0.58
SEC61A1P61619 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 SUDS3P1-201ENST00000505831 966 ntBASIC18.65■□□□□ 0.58
SEC61A1P61619 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SEC61A1P61619 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.65■□□□□ 0.58
SEC61A1P61619 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
SEC61A1P61619 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.65■□□□□ 0.58
SEC61A1P61619 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
SEC61A1P61619 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A1P61619 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEC61A1P61619 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SEC61A1P61619 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEC61A1P61619 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SEC61A1P61619 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SEC61A1P61619 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A1P61619 MIR3181-201ENST00000578512 73 ntBASIC18.64■□□□□ 0.57
SEC61A1P61619 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.64■□□□□ 0.57
SEC61A1P61619 AL355001.2-201ENST00000620617 1191 ntBASIC18.64■□□□□ 0.57
SEC61A1P61619 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A1P61619 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A1P61619 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SEC61A1P61619 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A1P61619 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC61A1P61619 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC61A1P61619 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A1P61619 AL353803.4-201ENST00000565882 1934 ntBASIC18.63■□□□□ 0.57
SEC61A1P61619 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC61A1P61619 AF213884.3-201ENST00000563833 479 ntBASIC18.63■□□□□ 0.57
SEC61A1P61619 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SEC61A1P61619 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
SEC61A1P61619 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SEC61A1P61619 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC61A1P61619 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A1P61619 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SEC61A1P61619 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SEC61A1P61619 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 MIR935-201ENST00000401179 91 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.62■□□□□ 0.57
SEC61A1P61619 AP001330.3-201ENST00000520123 633 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.62■□□□□ 0.57
SEC61A1P61619 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.62■□□□□ 0.57
SEC61A1P61619 pRNA.6-201ENST00000610482 90 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 pRNA.5-201ENST00000612139 90 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SEC61A1P61619 AC011298.3-201ENST00000615796 283 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 pRNA.11-201ENST00000618423 90 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 pRNA.13-201ENST00000619112 90 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.62■□□□□ 0.57
SEC61A1P61619 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SEC61A1P61619 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SEC61A1P61619 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A1P61619 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SEC61A1P61619 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SEC61A1P61619 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A1P61619 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A1P61619 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SEC61A1P61619 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.61■□□□□ 0.57
SEC61A1P61619 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms