Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DEFA3P59666 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DEFA3P59666 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.84■□□□□ 0.61
DEFA3P59666 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.84■□□□□ 0.61
DEFA3P59666 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 HLA-V-202ENST00000446817 847 ntBASIC18.84■□□□□ 0.61
DEFA3P59666 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 AC090340.1-201ENST00000620778 4980 ntBASIC18.84■□□□□ 0.61
DEFA3P59666 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DEFA3P59666 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.84■□□□□ 0.61
DEFA3P59666 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DEFA3P59666 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
DEFA3P59666 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DEFA3P59666 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
DEFA3P59666 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 AC025884.2-201ENST00000553429 711 ntBASIC18.83■□□□□ 0.6
DEFA3P59666 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DEFA3P59666 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DEFA3P59666 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
DEFA3P59666 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DEFA3P59666 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
DEFA3P59666 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.82■□□□□ 0.6
DEFA3P59666 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.82■□□□□ 0.6
DEFA3P59666 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DEFA3P59666 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.82■□□□□ 0.6
DEFA3P59666 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
DEFA3P59666 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEFA3P59666 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DEFA3P59666 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.82■□□□□ 0.6
DEFA3P59666 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DEFA3P59666 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEFA3P59666 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEFA3P59666 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
DEFA3P59666 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEFA3P59666 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEFA3P59666 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEFA3P59666 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
DEFA3P59666 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
DEFA3P59666 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.8■□□□□ 0.6
DEFA3P59666 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
DEFA3P59666 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L13-201ENST00000554103 1267 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L15-201ENST00000611059 1267 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L23-201ENST00000615195 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L24-201ENST00000617576 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L22-201ENST00000618238 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L20-201ENST00000619712 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L21-201ENST00000622058 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L10-201ENST00000622460 1267 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 DUX4L25-201ENST00000624915 1269 ntBASIC18.8■□□□□ 0.6
DEFA3P59666 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DEFA3P59666 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
DEFA3P59666 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEFA3P59666 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms