Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.54■□□□□ 0.88
VSX2P58304 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.54■□□□□ 0.88
VSX2P58304 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VSX2P58304 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VSX2P58304 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VSX2P58304 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.54■□□□□ 0.88
VSX2P58304 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.54■□□□□ 0.88
VSX2P58304 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
VSX2P58304 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
VSX2P58304 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
VSX2P58304 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.53■□□□□ 0.88
VSX2P58304 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.53■□□□□ 0.88
VSX2P58304 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.53■□□□□ 0.88
VSX2P58304 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 AC005224.4-201ENST00000583262 1652 ntBASIC20.53■□□□□ 0.88
VSX2P58304 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VSX2P58304 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSX2P58304 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSX2P58304 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSX2P58304 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VSX2P58304 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VSX2P58304 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VSX2P58304 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
VSX2P58304 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.52■□□□□ 0.88
VSX2P58304 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.52■□□□□ 0.88
VSX2P58304 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.52■□□□□ 0.88
VSX2P58304 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.52■□□□□ 0.88
VSX2P58304 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.52■□□□□ 0.88
VSX2P58304 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSX2P58304 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
VSX2P58304 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VSX2P58304 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VSX2P58304 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.51■□□□□ 0.87
VSX2P58304 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
VSX2P58304 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.51■□□□□ 0.87
VSX2P58304 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 AL034346.1-201ENST00000568244 1277 ntBASIC20.51■□□□□ 0.87
VSX2P58304 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.51■□□□□ 0.87
VSX2P58304 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.51■□□□□ 0.87
VSX2P58304 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 AC233723.2-201ENST00000623798 2106 ntBASIC20.51■□□□□ 0.87
VSX2P58304 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.51■□□□□ 0.87
VSX2P58304 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VSX2P58304 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
VSX2P58304 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.5■□□□□ 0.87
VSX2P58304 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
VSX2P58304 KRT18P5-201ENST00000436075 1291 ntBASIC20.5■□□□□ 0.87
VSX2P58304 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VSX2P58304 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
VSX2P58304 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VSX2P58304 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
VSX2P58304 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.49■□□□□ 0.87
VSX2P58304 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.49■□□□□ 0.87
VSX2P58304 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.49■□□□□ 0.87
VSX2P58304 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VSX2P58304 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSX2P58304 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSX2P58304 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSX2P58304 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSX2P58304 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VSX2P58304 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSX2P58304 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.48■□□□□ 0.87
VSX2P58304 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.48■□□□□ 0.87
VSX2P58304 AC079140.4-201ENST00000507448 529 ntBASIC20.48■□□□□ 0.87
VSX2P58304 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.48■□□□□ 0.87
VSX2P58304 NTF6G-201ENST00000591094 616 ntBASIC20.48■□□□□ 0.87
VSX2P58304 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
VSX2P58304 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms