Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN6P56747 PRORSD1P-201ENST00000295112 541 ntBASIC20.68■□□□□ 0.9
CLDN6P56747 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN6P56747 AC133552.2-202ENST00000575694 574 ntBASIC20.68■□□□□ 0.9
CLDN6P56747 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN6P56747 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN6P56747 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN6P56747 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN6P56747 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN6P56747 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN6P56747 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN6P56747 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN6P56747 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN6P56747 KRT18P29-201ENST00000397031 1267 ntBASIC20.67■□□□□ 0.9
CLDN6P56747 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN6P56747 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN6P56747 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN6P56747 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CLDN6P56747 RPS2P52-201ENST00000469610 820 ntBASIC20.66■□□□□ 0.9
CLDN6P56747 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.66■□□□□ 0.9
CLDN6P56747 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN6P56747 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN6P56747 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN6P56747 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN6P56747 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN6P56747 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN6P56747 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN6P56747 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CLDN6P56747 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN6P56747 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN6P56747 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 AC010141.2-201ENST00000452426 721 ntBASIC20.65■□□□□ 0.9
CLDN6P56747 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN6P56747 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN6P56747 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN6P56747 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN6P56747 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN6P56747 MIPEPP3-201ENST00000412105 444 ntBASIC20.64■□□□□ 0.89
CLDN6P56747 AC073210.2-201ENST00000430369 194 ntBASIC20.64■□□□□ 0.89
CLDN6P56747 CYP2T1P-201ENST00000432607 1285 ntBASIC20.64■□□□□ 0.89
CLDN6P56747 ITM2C-210ENST00000620962 501 ntBASIC20.64■□□□□ 0.89
CLDN6P56747 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN6P56747 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN6P56747 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN6P56747 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN6P56747 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLDN6P56747 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN6P56747 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN6P56747 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLDN6P56747 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 AC093787.1-201ENST00000450396 207 ntBASIC20.63■□□□□ 0.89
CLDN6P56747 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN6P56747 SLC7A5P1-201ENST00000568957 537 ntBASIC20.63■□□□□ 0.89
CLDN6P56747 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN6P56747 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN6P56747 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN6P56747 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN6P56747 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN6P56747 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.62■□□□□ 0.89
CLDN6P56747 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN6P56747 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN6P56747 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN6P56747 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CLDN6P56747 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLDN6P56747 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CLDN6P56747 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN6P56747 AC068338.2-201ENST00000563278 1430 ntBASIC20.61■□□□□ 0.89
CLDN6P56747 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN6P56747 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN6P56747 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN6P56747 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLDN6P56747 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.61■□□□□ 0.89
CLDN6P56747 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.61■□□□□ 0.89
CLDN6P56747 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN6P56747 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.61■□□□□ 0.89
CLDN6P56747 MIR4758-201ENST00000577688 71 ntBASIC20.61■□□□□ 0.89
CLDN6P56747 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms