Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDR1P51861 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDR1P51861 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDR1P51861 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.33■■□□□ 1.33
CDR1P51861 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.33■■□□□ 1.33
CDR1P51861 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.33■■□□□ 1.33
CDR1P51861 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.33■■□□□ 1.33
CDR1P51861 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.33■■□□□ 1.33
CDR1P51861 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDR1P51861 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CDR1P51861 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDR1P51861 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDR1P51861 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDR1P51861 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.32■■□□□ 1.32
CDR1P51861 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDR1P51861 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDR1P51861 MIR572-201ENST00000384983 95 ntBASIC23.32■■□□□ 1.32
CDR1P51861 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.32■■□□□ 1.32
CDR1P51861 AL162430.1-201ENST00000480705 870 ntBASIC23.32■■□□□ 1.32
CDR1P51861 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.32■■□□□ 1.32
CDR1P51861 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.32■■□□□ 1.32
CDR1P51861 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.32■■□□□ 1.32
CDR1P51861 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDR1P51861 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDR1P51861 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CDR1P51861 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CDR1P51861 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDR1P51861 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.31■■□□□ 1.32
CDR1P51861 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CDR1P51861 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDR1P51861 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDR1P51861 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CDR1P51861 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.3■■□□□ 1.32
CDR1P51861 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.3■■□□□ 1.32
CDR1P51861 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.3■■□□□ 1.32
CDR1P51861 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDR1P51861 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDR1P51861 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.3■■□□□ 1.32
CDR1P51861 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDR1P51861 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.3■■□□□ 1.32
CDR1P51861 AC012414.1-201ENST00000556676 535 ntBASIC23.3■■□□□ 1.32
CDR1P51861 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDR1P51861 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDR1P51861 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.3■■□□□ 1.32
CDR1P51861 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.29■■□□□ 1.32
CDR1P51861 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
CDR1P51861 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.29■■□□□ 1.32
CDR1P51861 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CDR1P51861 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDR1P51861 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDR1P51861 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
CDR1P51861 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDR1P51861 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CDR1P51861 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDR1P51861 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.28■■□□□ 1.32
CDR1P51861 AC105233.4-201ENST00000642045 216 ntBASIC23.28■■□□□ 1.32
CDR1P51861 GUSBP5-202ENST00000510805 1989 ntBASIC23.28■■□□□ 1.32
CDR1P51861 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.28■■□□□ 1.32
CDR1P51861 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDR1P51861 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CDR1P51861 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms