Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCFC1P51610 AC093827.2-201ENST00000512654 315 ntBASIC18.83■□□□□ 0.6
HCFC1P51610 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.82■□□□□ 0.6
HCFC1P51610 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HCFC1P51610 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.82■□□□□ 0.6
HCFC1P51610 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HCFC1P51610 AC010141.2-201ENST00000452426 721 ntBASIC18.82■□□□□ 0.6
HCFC1P51610 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCFC1P51610 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HCFC1P51610 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.81■□□□□ 0.6
HCFC1P51610 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.81■□□□□ 0.6
HCFC1P51610 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.81■□□□□ 0.6
HCFC1P51610 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HCFC1P51610 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HCFC1P51610 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 AC010536.3-201ENST00000620306 533 ntBASIC18.81■□□□□ 0.6
HCFC1P51610 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HCFC1P51610 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCFC1P51610 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HCFC1P51610 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.8■□□□□ 0.6
HCFC1P51610 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HCFC1P51610 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCFC1P51610 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
HCFC1P51610 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCFC1P51610 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HCFC1P51610 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCFC1P51610 AP004607.7-201ENST00000527152 1677 ntBASIC18.8■□□□□ 0.6
HCFC1P51610 AC133561.1-201ENST00000568600 2415 ntBASIC18.8■□□□□ 0.6
HCFC1P51610 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 CYP2T1P-201ENST00000432607 1285 ntBASIC18.79■□□□□ 0.6
HCFC1P51610 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.79■□□□□ 0.6
HCFC1P51610 AP001160.3-201ENST00000601484 763 ntBASIC18.79■□□□□ 0.6
HCFC1P51610 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HCFC1P51610 AC068338.2-201ENST00000563278 1430 ntBASIC18.79■□□□□ 0.6
HCFC1P51610 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HCFC1P51610 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HCFC1P51610 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HCFC1P51610 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.78■□□□□ 0.6
HCFC1P51610 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.78■□□□□ 0.6
HCFC1P51610 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 AL034346.1-201ENST00000568244 1277 ntBASIC18.78■□□□□ 0.6
HCFC1P51610 SLC7A5P1-201ENST00000568957 537 ntBASIC18.78■□□□□ 0.6
HCFC1P51610 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HCFC1P51610 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HCFC1P51610 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1P51610 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.78■□□□□ 0.6
HCFC1P51610 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.77■□□□□ 0.6
HCFC1P51610 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 MKRN4P-201ENST00000444706 1521 ntBASIC18.77■□□□□ 0.6
HCFC1P51610 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC1P51610 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC1P51610 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HCFC1P51610 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HCFC1P51610 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.77■□□□□ 0.6
HCFC1P51610 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HCFC1P51610 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.77■□□□□ 0.6
HCFC1P51610 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1P51610 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HCFC1P51610 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1P51610 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1P51610 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HCFC1P51610 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HCFC1P51610 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms