Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC34P49427 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CDC34P49427 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDC34P49427 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC34P49427 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC34P49427 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 THA1P-201ENST00000590384 1145 ntBASIC16.9■□□□□ 0.3
CDC34P49427 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC34P49427 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC34P49427 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC34P49427 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC34P49427 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.89■□□□□ 0.3
CDC34P49427 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDC34P49427 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CDC34P49427 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDC34P49427 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC34P49427 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC34P49427 AC139795.1-202ENST00000500444 432 ntBASIC16.89■□□□□ 0.29
CDC34P49427 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC34P49427 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDC34P49427 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC34P49427 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC34P49427 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.88■□□□□ 0.29
CDC34P49427 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDC34P49427 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC34P49427 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDC34P49427 LINC01006-201ENST00000333319 2292 ntBASIC16.87■□□□□ 0.29
CDC34P49427 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CDC34P49427 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDC34P49427 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.87■□□□□ 0.29
CDC34P49427 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 AC129492.7-201ENST00000622992 756 ntBASIC16.87■□□□□ 0.29
CDC34P49427 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.87■□□□□ 0.29
CDC34P49427 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC34P49427 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDC34P49427 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms