Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC9A3P48764 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SLC9A3P48764 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 AC010542.4-201ENST00000563151 1910 ntBASIC19.59■□□□□ 0.73
SLC9A3P48764 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC9A3P48764 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SLC9A3P48764 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC9A3P48764 AC079089.2-201ENST00000531211 1277 ntBASIC19.59■□□□□ 0.73
SLC9A3P48764 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC9A3P48764 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC9A3P48764 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC9A3P48764 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SLC9A3P48764 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC9A3P48764 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC9A3P48764 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC9A3P48764 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC9A3P48764 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC9A3P48764 SRD5A1P1-201ENST00000442297 786 ntBASIC19.58■□□□□ 0.72
SLC9A3P48764 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SLC9A3P48764 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SLC9A3P48764 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC9A3P48764 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SLC9A3P48764 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC9A3P48764 AC073130.3-201ENST00000624389 2278 ntBASIC19.58■□□□□ 0.72
SLC9A3P48764 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC9A3P48764 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC9A3P48764 FAM99A-202ENST00000538190 1989 ntBASIC19.57■□□□□ 0.72
SLC9A3P48764 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 OR2I1P-207ENST00000453522 948 ntBASIC19.57■□□□□ 0.72
SLC9A3P48764 MIR3181-201ENST00000578512 73 ntBASIC19.57■□□□□ 0.72
SLC9A3P48764 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SLC9A3P48764 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.57■□□□□ 0.72
SLC9A3P48764 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC9A3P48764 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC9A3P48764 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC9A3P48764 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SLC9A3P48764 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC9A3P48764 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC9A3P48764 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC9A3P48764 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC9A3P48764 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC9A3P48764 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC9A3P48764 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLC9A3P48764 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC9A3P48764 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC9A3P48764 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC9A3P48764 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC9A3P48764 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC9A3P48764 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 AC087239.1-201ENST00000622671 572 ntBASIC19.55■□□□□ 0.72
SLC9A3P48764 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.55■□□□□ 0.72
SLC9A3P48764 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SLC9A3P48764 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC9A3P48764 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC9A3P48764 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC9A3P48764 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC9A3P48764 AL512631.2-201ENST00000604634 923 ntBASIC19.54■□□□□ 0.72
SLC9A3P48764 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC9A3P48764 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC9A3P48764 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC9A3P48764 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC9A3P48764 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC9A3P48764 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC9A3P48764 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms