Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1DP48730 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.64■■□□□ 1.05
CSNK1DP48730 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1DP48730 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1DP48730 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1DP48730 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1DP48730 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1DP48730 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1DP48730 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.63■■□□□ 1.05
CSNK1DP48730 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.63■■□□□ 1.05
CSNK1DP48730 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.63■■□□□ 1.05
CSNK1DP48730 AC079140.4-201ENST00000507448 529 ntBASIC21.63■■□□□ 1.05
CSNK1DP48730 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.63■■□□□ 1.05
CSNK1DP48730 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.63■■□□□ 1.05
CSNK1DP48730 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1DP48730 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1DP48730 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1DP48730 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1DP48730 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.62■■□□□ 1.05
CSNK1DP48730 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
CSNK1DP48730 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CSNK1DP48730 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.62■■□□□ 1.05
CSNK1DP48730 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CSNK1DP48730 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.62■■□□□ 1.05
CSNK1DP48730 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1DP48730 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.62■■□□□ 1.05
CSNK1DP48730 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1DP48730 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.62■■□□□ 1.05
CSNK1DP48730 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CSNK1DP48730 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1DP48730 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.61■■□□□ 1.05
CSNK1DP48730 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.61■■□□□ 1.05
CSNK1DP48730 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.61■■□□□ 1.05
CSNK1DP48730 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CSNK1DP48730 AC133561.1-201ENST00000568600 2415 ntBASIC21.61■■□□□ 1.05
CSNK1DP48730 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1DP48730 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.61■■□□□ 1.05
CSNK1DP48730 AL117328.2-201ENST00000624617 1940 ntBASIC21.61■■□□□ 1.05
CSNK1DP48730 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1DP48730 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1DP48730 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
CSNK1DP48730 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.6■■□□□ 1.05
CSNK1DP48730 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.6■■□□□ 1.05
CSNK1DP48730 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 AL162430.1-201ENST00000480705 870 ntBASIC21.6■■□□□ 1.05
CSNK1DP48730 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.6■■□□□ 1.05
CSNK1DP48730 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1DP48730 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1DP48730 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.6■■□□□ 1.05
CSNK1DP48730 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.6■■□□□ 1.05
CSNK1DP48730 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1DP48730 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1DP48730 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1DP48730 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.59■■□□□ 1.05
CSNK1DP48730 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.59■■□□□ 1.05
CSNK1DP48730 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.59■■□□□ 1.05
CSNK1DP48730 NTF6G-201ENST00000591094 616 ntBASIC21.59■■□□□ 1.05
CSNK1DP48730 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1DP48730 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.58■■□□□ 1.05
CSNK1DP48730 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
CSNK1DP48730 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CSNK1DP48730 KRT18P5-201ENST00000436075 1291 ntBASIC21.58■■□□□ 1.05
CSNK1DP48730 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.58■■□□□ 1.05
CSNK1DP48730 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1DP48730 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1DP48730 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1DP48730 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1DP48730 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CSNK1DP48730 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1DP48730 AP004607.4-201ENST00000530158 1459 ntBASIC21.58■■□□□ 1.04
CSNK1DP48730 KRT87P-202ENST00000534226 1464 ntBASIC21.58■■□□□ 1.04
CSNK1DP48730 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1DP48730 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
CSNK1DP48730 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1DP48730 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms