Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNC1P48547 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNC1P48547 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNC1P48547 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNC1P48547 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNC1P48547 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNC1P48547 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNC1P48547 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNC1P48547 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KCNC1P48547 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KCNC1P48547 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNC1P48547 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNC1P48547 Z98882.1-201ENST00000622160 2253 ntBASIC21.08■□□□□ 0.96
KCNC1P48547 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNC1P48547 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.08■□□□□ 0.96
KCNC1P48547 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNC1P48547 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNC1P48547 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
KCNC1P48547 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KCNC1P48547 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNC1P48547 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNC1P48547 AC008406.3-201ENST00000620001 1374 ntBASIC21.07■□□□□ 0.96
KCNC1P48547 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KCNC1P48547 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.07■□□□□ 0.96
KCNC1P48547 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNC1P48547 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KCNC1P48547 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
KCNC1P48547 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KCNC1P48547 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KCNC1P48547 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNC1P48547 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNC1P48547 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNC1P48547 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
KCNC1P48547 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 AP005435.1-201ENST00000529293 1178 ntBASIC21.05■□□□□ 0.96
KCNC1P48547 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.05■□□□□ 0.96
KCNC1P48547 AC087239.1-201ENST00000622671 572 ntBASIC21.05■□□□□ 0.96
KCNC1P48547 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNC1P48547 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 AF106564.1-201ENST00000607058 2553 ntBASIC21.04■□□□□ 0.96
KCNC1P48547 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNC1P48547 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
KCNC1P48547 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNC1P48547 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNC1P48547 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 UNC93B3-201ENST00000308076 687 ntBASIC21.03■□□□□ 0.96
KCNC1P48547 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNC1P48547 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNC1P48547 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNC1P48547 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNC1P48547 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNC1P48547 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNC1P48547 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNC1P48547 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.02■□□□□ 0.96
KCNC1P48547 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.02■□□□□ 0.96
KCNC1P48547 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNC1P48547 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNC1P48547 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNC1P48547 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.02■□□□□ 0.96
KCNC1P48547 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KCNC1P48547 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KCNC1P48547 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNC1P48547 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KCNC1P48547 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNC1P48547 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KCNC1P48547 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms