Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP13P45452 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.3■■□□□ 1.16
MMP13P45452 AL031602.1-201ENST00000633169 911 ntBASIC22.3■■□□□ 1.16
MMP13P45452 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.29■■□□□ 1.16
MMP13P45452 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.29■■□□□ 1.16
MMP13P45452 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 EDA-201ENST00000338901 1233 ntBASIC22.29■■□□□ 1.16
MMP13P45452 BX842568.3-201ENST00000418104 571 ntBASIC22.29■■□□□ 1.16
MMP13P45452 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
MMP13P45452 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.29■■□□□ 1.16
MMP13P45452 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.29■■□□□ 1.16
MMP13P45452 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.29■■□□□ 1.16
MMP13P45452 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP13P45452 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP13P45452 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP13P45452 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP13P45452 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.28■■□□□ 1.16
MMP13P45452 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP13P45452 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
MMP13P45452 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
MMP13P45452 AC005229.4-201ENST00000610085 2198 ntBASIC22.28■■□□□ 1.16
MMP13P45452 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP13P45452 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP13P45452 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP13P45452 AC133561.4-201ENST00000566112 224 ntBASIC22.27■■□□□ 1.16
MMP13P45452 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP13P45452 AC233992.3-201ENST00000607491 485 ntBASIC22.27■■□□□ 1.16
MMP13P45452 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP13P45452 AC068587.7-201ENST00000641602 218 ntBASIC22.27■■□□□ 1.16
MMP13P45452 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.26■■□□□ 1.15
MMP13P45452 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MMP13P45452 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
MMP13P45452 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MMP13P45452 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.26■■□□□ 1.15
MMP13P45452 AC008764.7-201ENST00000593779 1081 ntBASIC22.26■■□□□ 1.15
MMP13P45452 AL355001.2-201ENST00000620617 1191 ntBASIC22.26■■□□□ 1.15
MMP13P45452 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MMP13P45452 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP13P45452 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP13P45452 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.25■■□□□ 1.15
MMP13P45452 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP13P45452 AP001330.3-201ENST00000520123 633 ntBASIC22.25■■□□□ 1.15
MMP13P45452 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP13P45452 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP13P45452 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.24■■□□□ 1.15
MMP13P45452 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP13P45452 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP13P45452 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.24■■□□□ 1.15
MMP13P45452 AC027682.1-201ENST00000562846 899 ntBASIC22.24■■□□□ 1.15
MMP13P45452 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 AL031432.3-201ENST00000607698 485 ntBASIC22.24■■□□□ 1.15
MMP13P45452 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
MMP13P45452 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
MMP13P45452 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP13P45452 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP13P45452 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MMP13P45452 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP13P45452 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MMP13P45452 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.23■■□□□ 1.15
MMP13P45452 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.23■■□□□ 1.15
MMP13P45452 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
MMP13P45452 AP005435.1-201ENST00000529293 1178 ntBASIC22.23■■□□□ 1.15
MMP13P45452 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.23■■□□□ 1.15
MMP13P45452 AF213884.3-201ENST00000563833 479 ntBASIC22.23■■□□□ 1.15
MMP13P45452 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.23■■□□□ 1.15
MMP13P45452 CA15P2-201ENST00000611168 834 ntBASIC22.23■■□□□ 1.15
MMP13P45452 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MMP13P45452 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms