Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RPL15BYMR121C 615 nt3.09□□□□□ -1.91
CDC40P40968 YNL057WYNL057W 333 nt3.09□□□□□ -1.91
CDC40P40968 EAF7YNL136W 1278 nt3.09□□□□□ -1.91
CDC40P40968 AAH1YNL141W 1044 nt3.09□□□□□ -1.91
CDC40P40968 YNL234WYNL234W 1281 nt3.09□□□□□ -1.91
CDC40P40968 YBR053CYBR053C 1077 nt3.09□□□□□ -1.91
CDC40P40968 TRM11YOL124C 1302 nt3.09□□□□□ -1.91
CDC40P40968 SMC3YJL074C 3693 nt3.09□□□□□ -1.92
CDC40P40968 ASI1YMR119W 1875 nt3.09□□□□□ -1.92
CDC40P40968 PKP2YGL059W 1476 nt3.09□□□□□ -1.92
CDC40P40968 POL2YNL262W 6669 nt3.08□□□□□ -1.92
CDC40P40968 YML096WYML096W 1578 nt3.08□□□□□ -1.92
CDC40P40968 VBA4YDR119W 2307 nt3.08□□□□□ -1.92
CDC40P40968 SMT3YDR510W 306 nt3.08□□□□□ -1.92
CDC40P40968 TAN1YGL232W 870 nt3.08□□□□□ -1.92
CDC40P40968 YGR114CYGR114C 390 nt3.08□□□□□ -1.92
CDC40P40968 PAN5YHR063C 1140 nt3.08□□□□□ -1.92
CDC40P40968 USB1YLR132C 873 nt3.08□□□□□ -1.92
CDC40P40968 YMR075C-AYMR075C-A 366 nt3.08□□□□□ -1.92
CDC40P40968 YMR141CYMR141C 309 nt3.08□□□□□ -1.92
CDC40P40968 RAD14YMR201C 1116 nt3.08□□□□□ -1.92
CDC40P40968 TRM112YNR046W 408 nt3.08□□□□□ -1.92
CDC40P40968 YPR053CYPR053C 456 nt3.08□□□□□ -1.92
CDC40P40968 SPP381YBR152W 876 nt3.08□□□□□ -1.92
CDC40P40968 LDH1YBR204C 1128 nt3.08□□□□□ -1.92
CDC40P40968 PRP8YHR165C 7242 nt3.08□□□□□ -1.92
CDC40P40968 RDS2YPL133C 1341 nt3.08□□□□□ -1.92
CDC40P40968 YDL176WYDL176W 2127 nt3.08□□□□□ -1.92
CDC40P40968 MAL12YGR292W 1755 nt3.07□□□□□ -1.92
CDC40P40968 MAL32YBR299W 1755 nt3.07□□□□□ -1.92
CDC40P40968 FAT1YBR041W 2010 nt3.07□□□□□ -1.92
CDC40P40968 MDV1YJL112W 2145 nt3.07□□□□□ -1.92
CDC40P40968 RRP42YDL111C 798 nt3.07□□□□□ -1.92
CDC40P40968 SPT2YER161C 1002 nt3.07□□□□□ -1.92
CDC40P40968 RPL1BYGL135W 654 nt3.07□□□□□ -1.92
CDC40P40968 GCD14YJL125C 1152 nt3.07□□□□□ -1.92
CDC40P40968 IME1YJR094C 1083 nt3.07□□□□□ -1.92
CDC40P40968 snR11snR11 258 nt3.07□□□□□ -1.92
CDC40P40968 IRC14YOR135C 342 nt3.07□□□□□ -1.92
CDC40P40968 YPL168WYPL168W 1293 nt3.07□□□□□ -1.92
CDC40P40968 RPL1AYPL220W 654 nt3.07□□□□□ -1.92
CDC40P40968 LCB4YOR171C 1875 nt3.07□□□□□ -1.92
CDC40P40968 YAK1YJL141C 2424 nt3.07□□□□□ -1.92
CDC40P40968 MRPL11YDL202W 750 nt3.06□□□□□ -1.92
CDC40P40968 YFL065CYFL065C 309 nt3.06□□□□□ -1.92
CDC40P40968 YGR064WYGR064W 369 nt3.06□□□□□ -1.92
CDC40P40968 YHR214C-EYHR214C-E 300 nt3.06□□□□□ -1.92
CDC40P40968 SNX4YJL036W 1272 nt3.06□□□□□ -1.92
CDC40P40968 NSP1YJL041W 2472 nt3.06□□□□□ -1.92
CDC40P40968 FIP1YJR093C 984 nt3.06□□□□□ -1.92
CDC40P40968 YAR070CYAR070C 300 nt3.06□□□□□ -1.92
CDC40P40968 YPT7YML001W 627 nt3.06□□□□□ -1.92
CDC40P40968 YML031C-AYML031C-A 336 nt3.06□□□□□ -1.92
CDC40P40968 MYO5YMR109W 3660 nt3.06□□□□□ -1.92
CDC40P40968 PHM7YOL084W 2976 nt3.06□□□□□ -1.92
CDC40P40968 YPL278CYPL278C 303 nt3.06□□□□□ -1.92
CDC40P40968 PIN3YPR154W 648 nt3.06□□□□□ -1.92
CDC40P40968 UBP5YER144C 2418 nt3.05□□□□□ -1.92
CDC40P40968 MSH2YOL090W 2895 nt3.05□□□□□ -1.92
CDC40P40968 SCM4YGR049W 564 nt3.05□□□□□ -1.92
CDC40P40968 YGR051CYGR051C 324 nt3.05□□□□□ -1.92
CDC40P40968 YGR190CYGR190C 366 nt3.05□□□□□ -1.92
CDC40P40968 GTT1YIR038C 705 nt3.05□□□□□ -1.92
CDC40P40968 EFB1YAL003W 621 nt3.05□□□□□ -1.92
CDC40P40968 LAC1YKL008C 1257 nt3.05□□□□□ -1.92
CDC40P40968 SIC1YLR079W 855 nt3.05□□□□□ -1.92
CDC40P40968 POP8YBL018C 402 nt3.05□□□□□ -1.92
CDC40P40968 RPS10AYOR293W 318 nt3.05□□□□□ -1.92
CDC40P40968 PEP4YPL154C 1218 nt3.05□□□□□ -1.92
CDC40P40968 BMS1YPL217C 3552 nt3.05□□□□□ -1.92
CDC40P40968 TFB2YPL122C 1542 nt3.04□□□□□ -1.92
CDC40P40968 YPR022CYPR022C 3402 nt3.04□□□□□ -1.92
CDC40P40968 AIM6YDL237W 1173 nt3.04□□□□□ -1.92
CDC40P40968 RPS25AYGR027C 327 nt3.04□□□□□ -1.92
CDC40P40968 YGR039WYGR039W 312 nt3.04□□□□□ -1.92
CDC40P40968 YIL024CYIL024C 570 nt3.04□□□□□ -1.92
CDC40P40968 ANB1YJR047C 474 nt3.04□□□□□ -1.92
CDC40P40968 AIM25YJR100C 984 nt3.04□□□□□ -1.92
CDC40P40968 SKG1YKR100C 1068 nt3.04□□□□□ -1.92
CDC40P40968 OST6YML019W 999 nt3.04□□□□□ -1.92
CDC40P40968 TUM1YOR251C 915 nt3.04□□□□□ -1.92
CDC40P40968 MRP2YPR166C 348 nt3.04□□□□□ -1.92
CDC40P40968 ARA1YBR149W 1035 nt3.04□□□□□ -1.92
CDC40P40968 RPA135YPR010C 3612 nt3.04□□□□□ -1.92
CDC40P40968 PFK26YIL107C 2484 nt3.03□□□□□ -1.92
CDC40P40968 TEC1YBR083W 1461 nt3.03□□□□□ -1.92
CDC40P40968 IOC3YFR013W 2364 nt3.03□□□□□ -1.92
CDC40P40968 ITT1YML068W 1395 nt3.03□□□□□ -1.92
CDC40P40968 RTT109YLL002W 1311 nt3.03□□□□□ -1.92
CDC40P40968 CIN1YOR349W 3045 nt3.03□□□□□ -1.92
CDC40P40968 BUD16YEL029C 939 nt3.03□□□□□ -1.92
CDC40P40968 AIM11YER093C-A 414 nt3.03□□□□□ -1.92
CDC40P40968 BCD1YHR040W 1101 nt3.03□□□□□ -1.92
CDC40P40968 tV(CAC)DtV(CAC)D 73 nt3.03□□□□□ -1.92
CDC40P40968 tV(CAC)HtV(CAC)H 73 nt3.03□□□□□ -1.92
CDC40P40968 YNK1YKL067W 462 nt3.03□□□□□ -1.92
CDC40P40968 ACP1YKL192C 378 nt3.03□□□□□ -1.92
CDC40P40968 COQ9YLR201C 783 nt3.03□□□□□ -1.92
CDC40P40968 RDN58-1RDN58-1 158 nt3.03□□□□□ -1.92
CDC40P40968 RPN13YLR421C 471 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms