Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDNFP39905 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.61■□□□□ 0.57
GDNFP39905 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.61■□□□□ 0.57
GDNFP39905 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.61■□□□□ 0.57
GDNFP39905 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.61■□□□□ 0.57
GDNFP39905 MTDHP2-201ENST00000601468 714 ntBASIC18.61■□□□□ 0.57
GDNFP39905 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GDNFP39905 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDNFP39905 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDNFP39905 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.61■□□□□ 0.57
GDNFP39905 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.61■□□□□ 0.57
GDNFP39905 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.61■□□□□ 0.57
GDNFP39905 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GDNFP39905 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GDNFP39905 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
GDNFP39905 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GDNFP39905 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.6■□□□□ 0.57
GDNFP39905 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDNFP39905 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
GDNFP39905 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GDNFP39905 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
GDNFP39905 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.59■□□□□ 0.57
GDNFP39905 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GDNFP39905 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.59■□□□□ 0.57
GDNFP39905 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.59■□□□□ 0.57
GDNFP39905 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.59■□□□□ 0.57
GDNFP39905 AC010997.5-201ENST00000609182 354 ntBASIC18.59■□□□□ 0.57
GDNFP39905 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GDNFP39905 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GDNFP39905 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDNFP39905 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GDNFP39905 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDNFP39905 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDNFP39905 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.57
GDNFP39905 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.58■□□□□ 0.56
GDNFP39905 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 GUSBP5-201ENST00000418136 578 ntBASIC18.58■□□□□ 0.56
GDNFP39905 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.58■□□□□ 0.56
GDNFP39905 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.58■□□□□ 0.56
GDNFP39905 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GDNFP39905 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GDNFP39905 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDNFP39905 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.58■□□□□ 0.56
GDNFP39905 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GDNFP39905 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.57■□□□□ 0.56
GDNFP39905 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GDNFP39905 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GDNFP39905 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 RNF165-205ENST00000588679 2904 ntBASIC18.57■□□□□ 0.56
GDNFP39905 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.57■□□□□ 0.56
GDNFP39905 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDNFP39905 AC005703.6-201ENST00000623265 1329 ntBASIC18.56■□□□□ 0.56
GDNFP39905 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDNFP39905 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GDNFP39905 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.56■□□□□ 0.56
GDNFP39905 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.56■□□□□ 0.56
GDNFP39905 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.56■□□□□ 0.56
GDNFP39905 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.56■□□□□ 0.56
GDNFP39905 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDNFP39905 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDNFP39905 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDNFP39905 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GDNFP39905 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDNFP39905 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms