Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKN1AP38936 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKN1AP38936 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
CDKN1AP38936 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDKN1AP38936 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN1AP38936 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN1AP38936 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDKN1AP38936 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN1AP38936 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN1AP38936 AC092068.2-201ENST00000590491 1708 ntBASIC18.32■□□□□ 0.52
CDKN1AP38936 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN1AP38936 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN1AP38936 NCF1B-203ENST00000435988 1254 ntBASIC18.31■□□□□ 0.52
CDKN1AP38936 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKN1AP38936 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.31■□□□□ 0.52
CDKN1AP38936 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.31■□□□□ 0.52
CDKN1AP38936 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN1AP38936 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 UBE2DNL-204ENST00000602536 740 ntBASIC18.31■□□□□ 0.52
CDKN1AP38936 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKN1AP38936 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN1AP38936 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDKN1AP38936 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 DUSP8P5-201ENST00000422884 1815 ntBASIC18.3■□□□□ 0.52
CDKN1AP38936 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN1AP38936 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKN1AP38936 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDKN1AP38936 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDKN1AP38936 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDKN1AP38936 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKN1AP38936 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN1AP38936 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKN1AP38936 GPX1P1-201ENST00000388829 606 ntBASIC18.29■□□□□ 0.52
CDKN1AP38936 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDKN1AP38936 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKN1AP38936 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKN1AP38936 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKN1AP38936 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKN1AP38936 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKN1AP38936 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN1AP38936 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDKN1AP38936 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN1AP38936 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.28■□□□□ 0.52
CDKN1AP38936 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKN1AP38936 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKN1AP38936 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKN1AP38936 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDKN1AP38936 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKN1AP38936 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.27■□□□□ 0.52
CDKN1AP38936 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDKN1AP38936 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.27■□□□□ 0.52
CDKN1AP38936 AC079089.2-201ENST00000531211 1277 ntBASIC18.27■□□□□ 0.52
CDKN1AP38936 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKN1AP38936 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDKN1AP38936 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKN1AP38936 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDKN1AP38936 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKN1AP38936 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 AP004607.7-201ENST00000527152 1677 ntBASIC18.26■□□□□ 0.51
CDKN1AP38936 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKN1AP38936 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms