Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.36■■□□□ 1.01
HTR1BP28222 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTR1BP28222 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.36■■□□□ 1.01
HTR1BP28222 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.36■■□□□ 1.01
HTR1BP28222 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.36■■□□□ 1.01
HTR1BP28222 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR1BP28222 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR1BP28222 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HTR1BP28222 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.36■■□□□ 1.01
HTR1BP28222 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR1BP28222 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HTR1BP28222 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.35■■□□□ 1.01
HTR1BP28222 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.35■■□□□ 1.01
HTR1BP28222 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HTR1BP28222 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTR1BP28222 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HTR1BP28222 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.34■■□□□ 1.01
HTR1BP28222 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.34■■□□□ 1.01
HTR1BP28222 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.34■■□□□ 1.01
HTR1BP28222 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR1BP28222 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.34■■□□□ 1.01
HTR1BP28222 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR1BP28222 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR1BP28222 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HTR1BP28222 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HTR1BP28222 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HTR1BP28222 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 KRT19P1-201ENST00000405746 1186 ntBASIC21.33■■□□□ 1.01
HTR1BP28222 AC016769.1-201ENST00000409132 1010 ntBASIC21.33■■□□□ 1.01
HTR1BP28222 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.33■■□□□ 1.01
HTR1BP28222 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTR1BP28222 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.33■■□□□ 1.01
HTR1BP28222 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.33■■□□□ 1.01
HTR1BP28222 AC092437.1-201ENST00000624794 1048 ntBASIC21.33■■□□□ 1.01
HTR1BP28222 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HTR1BP28222 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
HTR1BP28222 AC005224.4-201ENST00000583262 1652 ntBASIC21.33■■□□□ 1
HTR1BP28222 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.33■■□□□ 1
HTR1BP28222 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HTR1BP28222 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1
HTR1BP28222 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.33■■□□□ 1
HTR1BP28222 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.32■■□□□ 1
HTR1BP28222 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.32■■□□□ 1
HTR1BP28222 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
HTR1BP28222 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HTR1BP28222 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.32■■□□□ 1
HTR1BP28222 AC004911.1-201ENST00000416316 871 ntBASIC21.32■■□□□ 1
HTR1BP28222 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.32■■□□□ 1
HTR1BP28222 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 AP004607.4-201ENST00000530158 1459 ntBASIC21.32■■□□□ 1
HTR1BP28222 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HTR1BP28222 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HTR1BP28222 AC004854.2-201ENST00000608450 1441 ntBASIC21.31■■□□□ 1
HTR1BP28222 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
HTR1BP28222 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HTR1BP28222 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.31■■□□□ 1
HTR1BP28222 LINC00565-201ENST00000562710 2331 ntBASIC21.31■■□□□ 1
HTR1BP28222 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.31■■□□□ 1
HTR1BP28222 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.31■■□□□ 1
HTR1BP28222 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.31■■□□□ 1
HTR1BP28222 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.31■■□□□ 1
HTR1BP28222 AC137761.2-201ENST00000561729 223 ntBASIC21.31■■□□□ 1
HTR1BP28222 AC145350.3-201ENST00000569033 163 ntBASIC21.31■■□□□ 1
HTR1BP28222 RARRES2P11-201ENST00000635158 484 ntBASIC21.31■■□□□ 1
HTR1BP28222 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.31■■□□□ 1
HTR1BP28222 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HTR1BP28222 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.31■■□□□ 1
HTR1BP28222 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.31■■□□□ 1
HTR1BP28222 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.31■■□□□ 1
HTR1BP28222 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.31■■□□□ 1
HTR1BP28222 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 OR7E47P-201ENST00000546390 1422 ntBASIC21.3■■□□□ 1
HTR1BP28222 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
HTR1BP28222 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.3■■□□□ 1
HTR1BP28222 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.3■■□□□ 1
HTR1BP28222 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.3■■□□□ 1
HTR1BP28222 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.3■■□□□ 1
HTR1BP28222 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTR1BP28222 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms