Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
VARSP26640 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARSP26640 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.03■□□□□ 0.96
VARSP26640 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARSP26640 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VARSP26640 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
VARSP26640 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VARSP26640 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VARSP26640 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
VARSP26640 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VARSP26640 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VARSP26640 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARSP26640 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARSP26640 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VARSP26640 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.02■□□□□ 0.96
VARSP26640 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VARSP26640 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.02■□□□□ 0.95
VARSP26640 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
VARSP26640 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
VARSP26640 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VARSP26640 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.01■□□□□ 0.95
VARSP26640 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 AP001330.3-201ENST00000520123 633 ntBASIC21.01■□□□□ 0.95
VARSP26640 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
VARSP26640 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.01■□□□□ 0.95
VARSP26640 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VARSP26640 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VARSP26640 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 RASA4CP-201ENST00000424092 1398 ntBASIC21■□□□□ 0.95
VARSP26640 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21■□□□□ 0.95
VARSP26640 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VARSP26640 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.99■□□□□ 0.95
VARSP26640 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VARSP26640 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.99■□□□□ 0.95
VARSP26640 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.99■□□□□ 0.95
VARSP26640 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VARSP26640 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.99■□□□□ 0.95
VARSP26640 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
VARSP26640 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
VARSP26640 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VARSP26640 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.98■□□□□ 0.95
VARSP26640 AC027682.1-201ENST00000562846 899 ntBASIC20.98■□□□□ 0.95
VARSP26640 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.98■□□□□ 0.95
VARSP26640 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.98■□□□□ 0.95
VARSP26640 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
VARSP26640 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.98■□□□□ 0.95
VARSP26640 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VARSP26640 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VARSP26640 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.98■□□□□ 0.95
VARSP26640 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARSP26640 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARSP26640 FBXW4P1-201ENST00000426721 2239 ntBASIC20.97■□□□□ 0.95
VARSP26640 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VARSP26640 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VARSP26640 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARSP26640 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
VARSP26640 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
VARSP26640 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
VARSP26640 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARSP26640 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
VARSP26640 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms