Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN3P20807 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPN3P20807 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN3P20807 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN3P20807 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN3P20807 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN3P20807 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.63■□□□□ 0.89
CAPN3P20807 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CAPN3P20807 AC026471.6-201ENST00000622954 1905 ntBASIC20.63■□□□□ 0.89
CAPN3P20807 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.63■□□□□ 0.89
CAPN3P20807 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN3P20807 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN3P20807 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN3P20807 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CAPN3P20807 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CAPN3P20807 AC073130.3-201ENST00000624389 2278 ntBASIC20.62■□□□□ 0.89
CAPN3P20807 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN3P20807 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.62■□□□□ 0.89
CAPN3P20807 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CAPN3P20807 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CAPN3P20807 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CAPN3P20807 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN3P20807 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CAPN3P20807 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN3P20807 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN3P20807 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CAPN3P20807 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN3P20807 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CAPN3P20807 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.61■□□□□ 0.89
CAPN3P20807 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CAPN3P20807 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CAPN3P20807 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN3P20807 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN3P20807 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN3P20807 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN3P20807 ZNRF2P3-201ENST00000424200 374 ntBASIC20.6■□□□□ 0.89
CAPN3P20807 AC142381.2-201ENST00000566120 298 ntBASIC20.6■□□□□ 0.89
CAPN3P20807 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN3P20807 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CAPN3P20807 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN3P20807 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN3P20807 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
CAPN3P20807 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN3P20807 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 AC026271.2-201ENST00000428091 497 ntBASIC20.59■□□□□ 0.89
CAPN3P20807 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN3P20807 MIR4466-201ENST00000606121 54 ntBASIC20.59■□□□□ 0.89
CAPN3P20807 AC106739.1-201ENST00000617035 715 ntBASIC20.59■□□□□ 0.89
CAPN3P20807 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN3P20807 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN3P20807 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CAPN3P20807 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN3P20807 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CAPN3P20807 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CAPN3P20807 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN3P20807 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
CAPN3P20807 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.58■□□□□ 0.88
CAPN3P20807 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN3P20807 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CAPN3P20807 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN3P20807 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms