Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PSMC3P17980 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PSMC3P17980 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PSMC3P17980 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PSMC3P17980 AC231657.2-201ENST00000624556 255 ntBASIC22.37■■□□□ 1.17
PSMC3P17980 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
PSMC3P17980 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PSMC3P17980 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.37■■□□□ 1.17
PSMC3P17980 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PSMC3P17980 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.37■■□□□ 1.17
PSMC3P17980 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.36■■□□□ 1.17
PSMC3P17980 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PSMC3P17980 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PSMC3P17980 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PSMC3P17980 ABHD17AP1-201ENST00000358206 933 ntBASIC22.36■■□□□ 1.17
PSMC3P17980 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PSMC3P17980 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.36■■□□□ 1.17
PSMC3P17980 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.36■■□□□ 1.17
PSMC3P17980 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PSMC3P17980 DUSP8P5-201ENST00000422884 1815 ntBASIC22.36■■□□□ 1.17
PSMC3P17980 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PSMC3P17980 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PSMC3P17980 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.35■■□□□ 1.17
PSMC3P17980 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PSMC3P17980 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.35■■□□□ 1.17
PSMC3P17980 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PSMC3P17980 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PSMC3P17980 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.35■■□□□ 1.17
PSMC3P17980 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.35■■□□□ 1.17
PSMC3P17980 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.35■■□□□ 1.17
PSMC3P17980 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
PSMC3P17980 AL121832.2-201ENST00000610979 668 ntBASIC22.35■■□□□ 1.17
PSMC3P17980 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.35■■□□□ 1.17
PSMC3P17980 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PSMC3P17980 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PSMC3P17980 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PSMC3P17980 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.34■■□□□ 1.17
PSMC3P17980 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.34■■□□□ 1.17
PSMC3P17980 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.34■■□□□ 1.17
PSMC3P17980 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.34■■□□□ 1.17
PSMC3P17980 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PSMC3P17980 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.34■■□□□ 1.17
PSMC3P17980 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.34■■□□□ 1.17
PSMC3P17980 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.34■■□□□ 1.17
PSMC3P17980 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PSMC3P17980 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
PSMC3P17980 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
PSMC3P17980 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PSMC3P17980 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PSMC3P17980 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PSMC3P17980 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PSMC3P17980 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PSMC3P17980 DUX4L16-201ENST00000555130 1264 ntBASIC22.33■■□□□ 1.17
PSMC3P17980 UBE2DNL-204ENST00000602536 740 ntBASIC22.33■■□□□ 1.17
PSMC3P17980 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PSMC3P17980 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PSMC3P17980 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PSMC3P17980 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PSMC3P17980 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PSMC3P17980 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PSMC3P17980 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.16
PSMC3P17980 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 AC007322.1-201ENST00000426983 750 ntBASIC22.32■■□□□ 1.16
PSMC3P17980 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 AC083906.2-201ENST00000511578 360 ntBASIC22.32■■□□□ 1.16
PSMC3P17980 AC142086.2-201ENST00000569753 217 ntBASIC22.32■■□□□ 1.16
PSMC3P17980 AL050303.2-201ENST00000619798 666 ntBASIC22.32■■□□□ 1.16
PSMC3P17980 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.32■■□□□ 1.16
PSMC3P17980 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PSMC3P17980 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PSMC3P17980 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.31■■□□□ 1.16
PSMC3P17980 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PSMC3P17980 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.31■■□□□ 1.16
PSMC3P17980 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.31■■□□□ 1.16
PSMC3P17980 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
PSMC3P17980 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.31■■□□□ 1.16
PSMC3P17980 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSMC3P17980 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms