Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP4P12644 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BMP4P12644 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.56■□□□□ 0.72
BMP4P12644 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.56■□□□□ 0.72
BMP4P12644 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.56■□□□□ 0.72
BMP4P12644 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP4P12644 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
BMP4P12644 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
BMP4P12644 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BMP4P12644 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.55■□□□□ 0.72
BMP4P12644 AC005837.3-201ENST00000612163 286 ntBASIC19.55■□□□□ 0.72
BMP4P12644 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.55■□□□□ 0.72
BMP4P12644 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BMP4P12644 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
BMP4P12644 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
BMP4P12644 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
BMP4P12644 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.54■□□□□ 0.72
BMP4P12644 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
BMP4P12644 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.54■□□□□ 0.72
BMP4P12644 PBX2P1-201ENST00000493219 1291 ntBASIC19.54■□□□□ 0.72
BMP4P12644 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.54■□□□□ 0.72
BMP4P12644 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.54■□□□□ 0.72
BMP4P12644 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
BMP4P12644 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BMP4P12644 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.54■□□□□ 0.72
BMP4P12644 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.53■□□□□ 0.72
BMP4P12644 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.53■□□□□ 0.72
BMP4P12644 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.53■□□□□ 0.72
BMP4P12644 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.53■□□□□ 0.72
BMP4P12644 AC106739.1-201ENST00000617035 715 ntBASIC19.53■□□□□ 0.72
BMP4P12644 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
BMP4P12644 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.53■□□□□ 0.72
BMP4P12644 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BMP4P12644 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
BMP4P12644 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
BMP4P12644 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.52■□□□□ 0.72
BMP4P12644 AC131274.2-201ENST00000580697 1507 ntBASIC19.52■□□□□ 0.72
BMP4P12644 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
BMP4P12644 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.52■□□□□ 0.72
BMP4P12644 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.52■□□□□ 0.72
BMP4P12644 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.52■□□□□ 0.72
BMP4P12644 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
BMP4P12644 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BMP4P12644 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.52■□□□□ 0.71
BMP4P12644 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BMP4P12644 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
BMP4P12644 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BMP4P12644 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
BMP4P12644 UNC93B3-201ENST00000308076 687 ntBASIC19.51■□□□□ 0.71
BMP4P12644 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.51■□□□□ 0.71
BMP4P12644 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BMP4P12644 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
BMP4P12644 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BMP4P12644 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
BMP4P12644 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms