Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL3P09001 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL3P09001 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
MRPL3P09001 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.22■□□□□ 0.67
MRPL3P09001 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL3P09001 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
MRPL3P09001 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MRPL3P09001 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPL3P09001 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPL3P09001 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 AC009299.2-201ENST00000482477 511 ntBASIC19.21■□□□□ 0.67
MRPL3P09001 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
MRPL3P09001 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
MRPL3P09001 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRPL3P09001 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL3P09001 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MRPL3P09001 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MRPL3P09001 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRPL3P09001 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 AL451085.2-201ENST00000605085 799 ntBASIC19.2■□□□□ 0.66
MRPL3P09001 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL3P09001 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.2■□□□□ 0.66
MRPL3P09001 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRPL3P09001 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MRPL3P09001 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
MRPL3P09001 FEM1AP4-201ENST00000443167 1987 ntBASIC19.19■□□□□ 0.66
MRPL3P09001 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPL3P09001 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPL3P09001 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 AC006455.2-201ENST00000429931 906 ntBASIC19.19■□□□□ 0.66
MRPL3P09001 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPL3P09001 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
MRPL3P09001 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.19■□□□□ 0.66
MRPL3P09001 AC133637.1-201ENST00000624115 1537 ntBASIC19.19■□□□□ 0.66
MRPL3P09001 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL3P09001 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MRPL3P09001 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.18■□□□□ 0.66
MRPL3P09001 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.18■□□□□ 0.66
MRPL3P09001 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 SLC25A24-204ENST00000569674 2357 ntBASIC19.18■□□□□ 0.66
MRPL3P09001 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.18■□□□□ 0.66
MRPL3P09001 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.18■□□□□ 0.66
MRPL3P09001 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MRPL3P09001 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.18■□□□□ 0.66
MRPL3P09001 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.18■□□□□ 0.66
MRPL3P09001 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MRPL3P09001 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL3P09001 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MRPL3P09001 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MRPL3P09001 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.17■□□□□ 0.66
MRPL3P09001 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 UNC93B8-201ENST00000511903 705 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 AC079089.2-201ENST00000531211 1277 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 pRNA.6-201ENST00000610482 90 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 pRNA.5-201ENST00000612139 90 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 MIR6724-1-201ENST00000616420 92 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 MIR6724-2-201ENST00000616483 92 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 MIR6724-4-201ENST00000617390 92 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 pRNA.11-201ENST00000618423 90 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 pRNA.13-201ENST00000619112 90 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 MIR6724-3-201ENST00000622482 92 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 AL031602.1-201ENST00000633169 911 ntBASIC19.17■□□□□ 0.66
MRPL3P09001 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MRPL3P09001 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.17■□□□□ 0.66
MRPL3P09001 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL3P09001 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.17■□□□□ 0.66
MRPL3P09001 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms