Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 TFB2YPL122C 1542 nt3.37□□□□□ -1.87
RAD3P06839 RIF1YBR275C 5751 nt3.37□□□□□ -1.87
RAD3P06839 SUP45YBR143C 1314 nt3.37□□□□□ -1.87
RAD3P06839 YMR1YJR110W 2067 nt3.37□□□□□ -1.87
RAD3P06839 MPC54YOR177C 1395 nt3.37□□□□□ -1.87
RAD3P06839 CAF130YGR134W 3369 nt3.36□□□□□ -1.87
RAD3P06839 YCR007CYCR007C 720 nt3.36□□□□□ -1.87
RAD3P06839 MMS21YEL019C 804 nt3.36□□□□□ -1.87
RAD3P06839 CDA2YLR308W 939 nt3.36□□□□□ -1.87
RAD3P06839 AIM41YOR215C 558 nt3.36□□□□□ -1.87
RAD3P06839 TIM12YBR091C 330 nt3.36□□□□□ -1.87
RAD3P06839 MAK21YDR060W 3078 nt3.36□□□□□ -1.87
RAD3P06839 YVC1YOR087W 2028 nt3.36□□□□□ -1.87
RAD3P06839 SHQ1YIL104C 1524 nt3.35□□□□□ -1.87
RAD3P06839 MSR1YHR091C 1932 nt3.35□□□□□ -1.87
RAD3P06839 POL2YNL262W 6669 nt3.35□□□□□ -1.87
RAD3P06839 MIC60YKR016W 1623 nt3.35□□□□□ -1.87
RAD3P06839 RAD2YGR258C 3096 nt3.35□□□□□ -1.87
RAD3P06839 GRX6YDL010W 696 nt3.35□□□□□ -1.87
RAD3P06839 RTN1YDR233C 888 nt3.35□□□□□ -1.87
RAD3P06839 WBP1YEL002C 1293 nt3.35□□□□□ -1.87
RAD3P06839 ERG26YGL001C 1050 nt3.35□□□□□ -1.87
RAD3P06839 YGR017WYGR017W 894 nt3.35□□□□□ -1.87
RAD3P06839 YNL320WYNL320W 855 nt3.35□□□□□ -1.87
RAD3P06839 NDJ1YOL104C 1059 nt3.35□□□□□ -1.87
RAD3P06839 FES1YBR101C 873 nt3.35□□□□□ -1.87
RAD3P06839 CCT7YJL111W 1653 nt3.35□□□□□ -1.87
RAD3P06839 DSN1YIR010W 1731 nt3.35□□□□□ -1.87
RAD3P06839 YDL176WYDL176W 2127 nt3.35□□□□□ -1.87
RAD3P06839 OAF3YKR064W 2592 nt3.35□□□□□ -1.87
RAD3P06839 YSP2YDR326C 4317 nt3.34□□□□□ -1.87
RAD3P06839 SRC1YML034W 2505 nt3.34□□□□□ -1.87
RAD3P06839 ISM1YPL040C 3009 nt3.34□□□□□ -1.87
RAD3P06839 YLR278CYLR278C 4026 nt3.34□□□□□ -1.87
RAD3P06839 SIN3YOL004W 4611 nt3.34□□□□□ -1.87
RAD3P06839 EXO5YBR163W 1758 nt3.34□□□□□ -1.87
RAD3P06839 YIL175WYIL175W 318 nt3.34□□□□□ -1.87
RAD3P06839 YJL222W-BYJL222W-B 138 nt3.34□□□□□ -1.87
RAD3P06839 SEC14YMR079W 915 nt3.34□□□□□ -1.87
RAD3P06839 YSF3YNL138W-A 258 nt3.34□□□□□ -1.87
RAD3P06839 CAT5YOR125C 702 nt3.34□□□□□ -1.87
RAD3P06839 TAF3YPL011C 1062 nt3.34□□□□□ -1.87
RAD3P06839 TAF14YPL129W 735 nt3.34□□□□□ -1.87
RAD3P06839 YBR300CYBR300C 498 nt3.34□□□□□ -1.87
RAD3P06839 CPA2YJR109C 3357 nt3.34□□□□□ -1.88
RAD3P06839 MGT1YDL200C 567 nt3.33□□□□□ -1.88
RAD3P06839 YDR149CYDR149C 708 nt3.33□□□□□ -1.88
RAD3P06839 ATP12YJL180C 978 nt3.33□□□□□ -1.88
RAD3P06839 RPL20BYOR312C 519 nt3.33□□□□□ -1.88
RAD3P06839 CLB5YPR120C 1308 nt3.33□□□□□ -1.88
RAD3P06839 UBP5YER144C 2418 nt3.33□□□□□ -1.88
RAD3P06839 CHS2YBR038W 2892 nt3.33□□□□□ -1.88
RAD3P06839 CUE3YGL110C 1875 nt3.33□□□□□ -1.88
RAD3P06839 HDA2YDR295C 2025 nt3.32□□□□□ -1.88
RAD3P06839 FUN30YAL019W 3396 nt3.32□□□□□ -1.88
RAD3P06839 PCL9YDL179W 915 nt3.32□□□□□ -1.88
RAD3P06839 YDR442WYDR442W 393 nt3.32□□□□□ -1.88
RAD3P06839 YEL032C-AYEL032C-A 162 nt3.32□□□□□ -1.88
RAD3P06839 YHR180WYHR180W 492 nt3.32□□□□□ -1.88
RAD3P06839 GOT1YMR292W 417 nt3.32□□□□□ -1.88
RAD3P06839 VAM10YOR068C 345 nt3.32□□□□□ -1.88
RAD3P06839 JIP5YPR169W 1479 nt3.32□□□□□ -1.88
RAD3P06839 RPA190YOR341W 4995 nt3.32□□□□□ -1.88
RAD3P06839 TRM1YDR120C 1713 nt3.31□□□□□ -1.88
RAD3P06839 CTK1YKL139W 1587 nt3.31□□□□□ -1.88
RAD3P06839 DSE3YOR264W 1293 nt3.31□□□□□ -1.88
RAD3P06839 snR42snR42 351 nt3.31□□□□□ -1.88
RAD3P06839 YBR242WYBR242W 717 nt3.31□□□□□ -1.88
RAD3P06839 PMS1YNL082W 2622 nt3.31□□□□□ -1.88
RAD3P06839 BCH1YMR237W 2175 nt3.31□□□□□ -1.88
RAD3P06839 CIN8YEL061C 3003 nt3.3□□□□□ -1.88
RAD3P06839 PHO5YBR093C 1404 nt3.3□□□□□ -1.88
RAD3P06839 BNA4YBL098W 1383 nt3.3□□□□□ -1.88
RAD3P06839 MEF1YLR069C 2286 nt3.3□□□□□ -1.88
RAD3P06839 DBP7YKR024C 2229 nt3.3□□□□□ -1.88
RAD3P06839 LSM6YDR378C 261 nt3.3□□□□□ -1.88
RAD3P06839 YHP1YDR451C 1062 nt3.3□□□□□ -1.88
RAD3P06839 TOS8YGL096W 831 nt3.3□□□□□ -1.88
RAD3P06839 PEX21YGR239C 867 nt3.3□□□□□ -1.88
RAD3P06839 PET130YJL023C 1044 nt3.3□□□□□ -1.88
RAD3P06839 RNH203YLR154C 333 nt3.3□□□□□ -1.88
RAD3P06839 INN1YNL152W 1230 nt3.3□□□□□ -1.88
RAD3P06839 RRG9YNL213C 645 nt3.3□□□□□ -1.88
RAD3P06839 REC8YPR007C 2043 nt3.3□□□□□ -1.88
RAD3P06839 TMA108YIL137C 2841 nt3.3□□□□□ -1.88
RAD3P06839 UBP14YBR058C 2346 nt3.3□□□□□ -1.88
RAD3P06839 YFL040WYFL040W 1623 nt3.3□□□□□ -1.88
RAD3P06839 DSL1YNL258C 2265 nt3.3□□□□□ -1.88
RAD3P06839 TPD3YAL016W 1908 nt3.29□□□□□ -1.88
RAD3P06839 YHR080CYHR080C 4038 nt3.29□□□□□ -1.88
RAD3P06839 YER147C-AYER147C-A 411 nt3.29□□□□□ -1.88
RAD3P06839 LSM1YJL124C 519 nt3.29□□□□□ -1.88
RAD3P06839 YLR225CYLR225C 1224 nt3.29□□□□□ -1.88
RAD3P06839 YNL144W-AYNL144W-A 84 nt3.29□□□□□ -1.88
RAD3P06839 INP52YNL106C 3552 nt3.28□□□□□ -1.88
RAD3P06839 HMS1YOR032C 1305 nt3.28□□□□□ -1.88
RAD3P06839 DTD1YDL219W 453 nt3.28□□□□□ -1.88
RAD3P06839 YDR250CYDR250C 276 nt3.28□□□□□ -1.88
RAD3P06839 NKP1YDR383C 717 nt3.28□□□□□ -1.88
RAD3P06839 ERP1YAR002C-A 660 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms