Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.91■■□□□ 1.26
RB1P06400 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RB1P06400 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.91■■□□□ 1.26
RB1P06400 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RB1P06400 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RB1P06400 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RB1P06400 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RB1P06400 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.9■■□□□ 1.26
RB1P06400 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RB1P06400 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.9■■□□□ 1.26
RB1P06400 AC053503.5-201ENST00000601508 636 ntBASIC22.9■■□□□ 1.26
RB1P06400 AC069236.1-201ENST00000604339 616 ntBASIC22.9■■□□□ 1.26
RB1P06400 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RB1P06400 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RB1P06400 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RB1P06400 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RB1P06400 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RB1P06400 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.89■■□□□ 1.26
RB1P06400 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RB1P06400 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.89■■□□□ 1.26
RB1P06400 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RB1P06400 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RB1P06400 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RB1P06400 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.89■■□□□ 1.25
RB1P06400 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RB1P06400 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RB1P06400 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.89■■□□□ 1.25
RB1P06400 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RB1P06400 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.88■■□□□ 1.25
RB1P06400 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.88■■□□□ 1.25
RB1P06400 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.88■■□□□ 1.25
RB1P06400 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.88■■□□□ 1.25
RB1P06400 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.88■■□□□ 1.25
RB1P06400 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.88■■□□□ 1.25
RB1P06400 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.88■■□□□ 1.25
RB1P06400 AP006294.2-201ENST00000641667 209 ntBASIC22.88■■□□□ 1.25
RB1P06400 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RB1P06400 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.88■■□□□ 1.25
RB1P06400 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.88■■□□□ 1.25
RB1P06400 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.87■■□□□ 1.25
RB1P06400 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.87■■□□□ 1.25
RB1P06400 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.87■■□□□ 1.25
RB1P06400 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.87■■□□□ 1.25
RB1P06400 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RB1P06400 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RB1P06400 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RB1P06400 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
RB1P06400 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.86■■□□□ 1.25
RB1P06400 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RB1P06400 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RB1P06400 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.86■■□□□ 1.25
RB1P06400 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.86■■□□□ 1.25
RB1P06400 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RB1P06400 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.86■■□□□ 1.25
RB1P06400 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RB1P06400 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RB1P06400 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.85■■□□□ 1.25
RB1P06400 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RB1P06400 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.85■■□□□ 1.25
RB1P06400 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.85■■□□□ 1.25
RB1P06400 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.85■■□□□ 1.25
RB1P06400 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.85■■□□□ 1.25
RB1P06400 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.85■■□□□ 1.25
RB1P06400 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.85■■□□□ 1.25
RB1P06400 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RB1P06400 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RB1P06400 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RB1P06400 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RB1P06400 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RB1P06400 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RB1P06400 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
RB1P06400 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
RB1P06400 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.84■■□□□ 1.25
RB1P06400 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.84■■□□□ 1.25
RB1P06400 OR7E47P-201ENST00000546390 1422 ntBASIC22.83■■□□□ 1.25
RB1P06400 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RB1P06400 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RB1P06400 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.83■■□□□ 1.25
RB1P06400 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RB1P06400 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms