Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GYPBP06028 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GYPBP06028 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
GYPBP06028 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
GYPBP06028 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GYPBP06028 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.25■□□□□ 0.67
GYPBP06028 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GYPBP06028 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GYPBP06028 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GYPBP06028 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
GYPBP06028 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.24■□□□□ 0.67
GYPBP06028 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.24■□□□□ 0.67
GYPBP06028 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.24■□□□□ 0.67
GYPBP06028 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.24■□□□□ 0.67
GYPBP06028 AL356740.2-201ENST00000601559 647 ntBASIC19.24■□□□□ 0.67
GYPBP06028 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.24■□□□□ 0.67
GYPBP06028 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.24■□□□□ 0.67
GYPBP06028 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GYPBP06028 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GYPBP06028 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
GYPBP06028 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.23■□□□□ 0.67
GYPBP06028 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.23■□□□□ 0.67
GYPBP06028 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GYPBP06028 MIR3181-201ENST00000578512 73 ntBASIC19.23■□□□□ 0.67
GYPBP06028 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.23■□□□□ 0.67
GYPBP06028 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.23■□□□□ 0.67
GYPBP06028 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.23■□□□□ 0.67
GYPBP06028 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GYPBP06028 OR7E47P-201ENST00000546390 1422 ntBASIC19.23■□□□□ 0.67
GYPBP06028 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.23■□□□□ 0.67
GYPBP06028 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.22■□□□□ 0.67
GYPBP06028 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GYPBP06028 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GYPBP06028 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
GYPBP06028 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 GUSBP5-201ENST00000418136 578 ntBASIC19.22■□□□□ 0.67
GYPBP06028 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.22■□□□□ 0.67
GYPBP06028 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GYPBP06028 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GYPBP06028 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.21■□□□□ 0.67
GYPBP06028 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GYPBP06028 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GYPBP06028 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
GYPBP06028 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.21■□□□□ 0.67
GYPBP06028 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.21■□□□□ 0.67
GYPBP06028 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.21■□□□□ 0.67
GYPBP06028 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GYPBP06028 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GYPBP06028 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.21■□□□□ 0.67
GYPBP06028 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GYPBP06028 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.21■□□□□ 0.67
GYPBP06028 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GYPBP06028 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GYPBP06028 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
GYPBP06028 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GYPBP06028 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GYPBP06028 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms