Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.68■■■□□ 2.18
COL5A2P05997 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
COL5A2P05997 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.68■■■□□ 2.18
COL5A2P05997 AC079089.2-201ENST00000531211 1277 ntBASIC28.68■■■□□ 2.18
COL5A2P05997 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
COL5A2P05997 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
COL5A2P05997 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.68■■■□□ 2.18
COL5A2P05997 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.68■■■□□ 2.18
COL5A2P05997 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
COL5A2P05997 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.68■■■□□ 2.18
COL5A2P05997 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
COL5A2P05997 DUSP5P2-201ENST00000426873 1033 ntBASIC28.67■■■□□ 2.18
COL5A2P05997 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
COL5A2P05997 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC28.67■■■□□ 2.18
COL5A2P05997 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.67■■■□□ 2.18
COL5A2P05997 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC28.67■■■□□ 2.18
COL5A2P05997 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL5A2P05997 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
COL5A2P05997 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.67■■■□□ 2.18
COL5A2P05997 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.66■■■□□ 2.18
COL5A2P05997 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 AC020928.2-201ENST00000588717 2197 ntBASIC28.66■■■□□ 2.18
COL5A2P05997 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.66■■■□□ 2.18
COL5A2P05997 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
COL5A2P05997 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
COL5A2P05997 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC28.66■■■□□ 2.18
COL5A2P05997 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC28.66■■■□□ 2.18
COL5A2P05997 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.66■■■□□ 2.18
COL5A2P05997 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC28.66■■■□□ 2.18
COL5A2P05997 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL5A2P05997 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
COL5A2P05997 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.65■■■□□ 2.18
COL5A2P05997 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
COL5A2P05997 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.65■■■□□ 2.18
COL5A2P05997 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
COL5A2P05997 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL5A2P05997 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL5A2P05997 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
COL5A2P05997 AL512625.2-201ENST00000417533 625 ntBASIC28.65■■■□□ 2.18
COL5A2P05997 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL5A2P05997 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL5A2P05997 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
COL5A2P05997 LINC01960-201ENST00000563759 1884 ntBASIC28.64■■■□□ 2.17
COL5A2P05997 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL5A2P05997 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.63■■■□□ 2.17
COL5A2P05997 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL5A2P05997 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.63■■■□□ 2.17
COL5A2P05997 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
COL5A2P05997 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL5A2P05997 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
COL5A2P05997 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL5A2P05997 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.62■■■□□ 2.17
COL5A2P05997 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.62■■■□□ 2.17
COL5A2P05997 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.62■■■□□ 2.17
COL5A2P05997 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
COL5A2P05997 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC28.62■■■□□ 2.17
COL5A2P05997 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.62■■■□□ 2.17
COL5A2P05997 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
COL5A2P05997 AP006587.3-201ENST00000525742 1516 ntBASIC28.62■■■□□ 2.17
COL5A2P05997 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL5A2P05997 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL5A2P05997 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.62■■■□□ 2.17
COL5A2P05997 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
COL5A2P05997 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL5A2P05997 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL5A2P05997 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
COL5A2P05997 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL5A2P05997 BX276092.2-201ENST00000417668 665 ntBASIC28.61■■■□□ 2.17
COL5A2P05997 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC28.61■■■□□ 2.17
COL5A2P05997 RHEB-204ENST00000472642 900 ntTSL 3 BASIC28.61■■■□□ 2.17
COL5A2P05997 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.61■■■□□ 2.17
COL5A2P05997 AC053503.5-201ENST00000601508 636 ntBASIC28.61■■■□□ 2.17
COL5A2P05997 AC069236.1-201ENST00000604339 616 ntBASIC28.61■■■□□ 2.17
COL5A2P05997 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL5A2P05997 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.61■■■□□ 2.17
COL5A2P05997 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL5A2P05997 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
COL5A2P05997 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.6■■■□□ 2.17
COL5A2P05997 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.6■■■□□ 2.17
COL5A2P05997 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.6■■■□□ 2.17
COL5A2P05997 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL5A2P05997 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL5A2P05997 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL5A2P05997 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
COL5A2P05997 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.59■■■□□ 2.17
COL5A2P05997 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC28.59■■■□□ 2.17
COL5A2P05997 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC28.59■■■□□ 2.17
COL5A2P05997 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC28.59■■■□□ 2.17
COL5A2P05997 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL5A2P05997 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC28.59■■■□□ 2.17
COL5A2P05997 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms