Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 Z98882.1-201ENST00000622160 2253 ntBASIC19.22■□□□□ 0.67
HLA-DPB1P04440 FP325331.1-202ENST00000623531 1380 ntBASIC19.22■□□□□ 0.67
HLA-DPB1P04440 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 AL117332.1-201ENST00000622628 974 ntBASIC19.22■□□□□ 0.67
HLA-DPB1P04440 AL121603.2-201ENST00000557373 2117 ntBASIC19.22■□□□□ 0.67
HLA-DPB1P04440 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DPB1P04440 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DPB1P04440 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 AL356740.2-201ENST00000601559 647 ntBASIC19.2■□□□□ 0.66
HLA-DPB1P04440 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 AC009086.3-201ENST00000623486 1008 ntBASIC19.2■□□□□ 0.66
HLA-DPB1P04440 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DPB1P04440 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 LINC01521-201ENST00000504184 1943 ntBASIC19.19■□□□□ 0.66
HLA-DPB1P04440 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 AC009102.2-201ENST00000606772 1639 ntBASIC19.19■□□□□ 0.66
HLA-DPB1P04440 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DPB1P04440 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 FEM1AP4-201ENST00000443167 1987 ntBASIC19.18■□□□□ 0.66
HLA-DPB1P04440 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DPB1P04440 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 MIR3621-201ENST00000580529 85 ntBASIC19.17■□□□□ 0.66
HLA-DPB1P04440 CA15P2-201ENST00000611168 834 ntBASIC19.17■□□□□ 0.66
HLA-DPB1P04440 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DPB1P04440 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms