Protein–RNA interactions for Protein: P01597

IGKV1-39, Immunoglobulin kappa variable 1-39, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39P01597 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IGKV1-39P01597 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1-39P01597 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
IGKV1-39P01597 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 AC104564.3-201ENST00000582367 638 ntBASIC17.42■□□□□ 0.38
IGKV1-39P01597 pRNA.6-201ENST00000610482 90 ntBASIC17.42■□□□□ 0.38
IGKV1-39P01597 pRNA.5-201ENST00000612139 90 ntBASIC17.42■□□□□ 0.38
IGKV1-39P01597 pRNA.11-201ENST00000618423 90 ntBASIC17.42■□□□□ 0.38
IGKV1-39P01597 pRNA.13-201ENST00000619112 90 ntBASIC17.42■□□□□ 0.38
IGKV1-39P01597 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.42■□□□□ 0.38
IGKV1-39P01597 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.42■□□□□ 0.38
IGKV1-39P01597 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1-39P01597 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.41■□□□□ 0.38
IGKV1-39P01597 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
IGKV1-39P01597 MIR6724-1-201ENST00000616420 92 ntBASIC17.41■□□□□ 0.38
IGKV1-39P01597 MIR6724-2-201ENST00000616483 92 ntBASIC17.41■□□□□ 0.38
IGKV1-39P01597 MIR6724-4-201ENST00000617390 92 ntBASIC17.41■□□□□ 0.38
IGKV1-39P01597 MIR6724-3-201ENST00000622482 92 ntBASIC17.41■□□□□ 0.38
IGKV1-39P01597 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1-39P01597 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.41■□□□□ 0.38
IGKV1-39P01597 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
IGKV1-39P01597 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 UNC93B8-201ENST00000511903 705 ntBASIC17.4■□□□□ 0.38
IGKV1-39P01597 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.4■□□□□ 0.38
IGKV1-39P01597 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1-39P01597 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
IGKV1-39P01597 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 RARRES2P1-201ENST00000474487 481 ntBASIC17.39■□□□□ 0.37
IGKV1-39P01597 AC009299.2-201ENST00000482477 511 ntBASIC17.39■□□□□ 0.37
IGKV1-39P01597 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.39■□□□□ 0.37
IGKV1-39P01597 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1-39P01597 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1-39P01597 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.38■□□□□ 0.37
IGKV1-39P01597 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV1-39P01597 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV1-39P01597 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1-39P01597 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV1-39P01597 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1-39P01597 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1-39P01597 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1-39P01597 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV1-39P01597 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms