Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AP004607.7-201ENST00000527152 1677 ntBASIC17.7■□□□□ 0.42
TGFAP01135 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.69■□□□□ 0.42
TGFAP01135 LINC01960-201ENST00000563759 1884 ntBASIC17.69■□□□□ 0.42
TGFAP01135 AC055733.4-201ENST00000638462 1354 ntBASIC17.69■□□□□ 0.42
TGFAP01135 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.69■□□□□ 0.42
TGFAP01135 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 SLC7A5P2-201ENST00000553010 536 ntBASIC17.69■□□□□ 0.42
TGFAP01135 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.69■□□□□ 0.42
TGFAP01135 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.69■□□□□ 0.42
TGFAP01135 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.69■□□□□ 0.42
TGFAP01135 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 ANOS2P-203ENST00000472227 1816 ntBASIC17.69■□□□□ 0.42
TGFAP01135 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TGFAP01135 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TGFAP01135 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFAP01135 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFAP01135 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.68■□□□□ 0.42
TGFAP01135 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 AF201337.1-201ENST00000520239 748 ntBASIC17.68■□□□□ 0.42
TGFAP01135 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TGFAP01135 AL138781.1-201ENST00000566567 1274 ntBASIC17.68■□□□□ 0.42
TGFAP01135 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.68■□□□□ 0.42
TGFAP01135 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.68■□□□□ 0.42
TGFAP01135 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.68■□□□□ 0.42
TGFAP01135 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFAP01135 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFAP01135 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFAP01135 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.67■□□□□ 0.42
TGFAP01135 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFAP01135 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFAP01135 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFAP01135 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFAP01135 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TGFAP01135 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TGFAP01135 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFAP01135 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TGFAP01135 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFAP01135 KRT18P20-201ENST00000548986 1279 ntBASIC17.66■□□□□ 0.42
TGFAP01135 AC105036.2-201ENST00000569468 176 ntBASIC17.66■□□□□ 0.42
TGFAP01135 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFAP01135 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TGFAP01135 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.65■□□□□ 0.42
TGFAP01135 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TGFAP01135 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.65■□□□□ 0.42
TGFAP01135 GUSBP6-202ENST00000438529 1198 ntBASIC17.65■□□□□ 0.42
TGFAP01135 AC010141.2-201ENST00000452426 721 ntBASIC17.65■□□□□ 0.42
TGFAP01135 AC138907.5-202ENST00000569484 235 ntBASIC17.65■□□□□ 0.42
TGFAP01135 AC010536.3-201ENST00000620306 533 ntBASIC17.65■□□□□ 0.42
TGFAP01135 AC133041.1-202ENST00000642053 222 ntBASIC17.65■□□□□ 0.42
TGFAP01135 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TGFAP01135 OR7E47P-201ENST00000546390 1422 ntBASIC17.64■□□□□ 0.42
TGFAP01135 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TGFAP01135 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TGFAP01135 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.64■□□□□ 0.41
TGFAP01135 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.64■□□□□ 0.41
TGFAP01135 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.64■□□□□ 0.41
TGFAP01135 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.64■□□□□ 0.41
TGFAP01135 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
TGFAP01135 AC092068.2-201ENST00000590491 1708 ntBASIC17.64■□□□□ 0.41
TGFAP01135 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TGFAP01135 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms