Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.86■■□□□ 1.09
PDGFBP01127 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.86■■□□□ 1.09
PDGFBP01127 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFBP01127 UBE2SP1-201ENST00000450587 669 ntBASIC21.86■■□□□ 1.09
PDGFBP01127 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.86■■□□□ 1.09
PDGFBP01127 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.86■■□□□ 1.09
PDGFBP01127 DUSP8P3-201ENST00000399571 1760 ntBASIC21.86■■□□□ 1.09
PDGFBP01127 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.86■■□□□ 1.09
PDGFBP01127 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PDGFBP01127 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 AP003733.4-201ENST00000623785 1697 ntBASIC21.85■■□□□ 1.09
PDGFBP01127 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.85■■□□□ 1.09
PDGFBP01127 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
PDGFBP01127 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.85■■□□□ 1.09
PDGFBP01127 AP003097.1-201ENST00000530657 1135 ntBASIC21.85■■□□□ 1.09
PDGFBP01127 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.85■■□□□ 1.09
PDGFBP01127 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.85■■□□□ 1.09
PDGFBP01127 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
PDGFBP01127 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFBP01127 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.84■■□□□ 1.09
PDGFBP01127 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.84■■□□□ 1.09
PDGFBP01127 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.84■■□□□ 1.09
PDGFBP01127 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.84■■□□□ 1.09
PDGFBP01127 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.84■■□□□ 1.09
PDGFBP01127 MIR4497-201ENST00000583208 89 ntBASIC21.84■■□□□ 1.09
PDGFBP01127 LINC00543-201ENST00000567234 1845 ntBASIC21.84■■□□□ 1.09
PDGFBP01127 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFBP01127 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFBP01127 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFBP01127 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFBP01127 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.83■■□□□ 1.09
PDGFBP01127 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.83■■□□□ 1.09
PDGFBP01127 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFBP01127 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.83■■□□□ 1.09
PDGFBP01127 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.83■■□□□ 1.09
PDGFBP01127 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.83■■□□□ 1.09
PDGFBP01127 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDGFBP01127 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.82■■□□□ 1.08
PDGFBP01127 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.82■■□□□ 1.08
PDGFBP01127 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.82■■□□□ 1.08
PDGFBP01127 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
PDGFBP01127 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.82■■□□□ 1.08
PDGFBP01127 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PDGFBP01127 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFBP01127 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFBP01127 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFBP01127 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFBP01127 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PDGFBP01127 KRT18P21-201ENST00000515767 1272 ntBASIC21.81■■□□□ 1.08
PDGFBP01127 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.81■■□□□ 1.08
PDGFBP01127 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.81■■□□□ 1.08
PDGFBP01127 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.81■■□□□ 1.08
PDGFBP01127 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.81■■□□□ 1.08
PDGFBP01127 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFBP01127 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PDGFBP01127 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDGFBP01127 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDGFBP01127 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDGFBP01127 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDGFBP01127 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PDGFBP01127 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.8■■□□□ 1.08
PDGFBP01127 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.8■■□□□ 1.08
PDGFBP01127 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.8■■□□□ 1.08
PDGFBP01127 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.8■■□□□ 1.08
PDGFBP01127 REXO1L12P-201ENST00000622156 912 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms