Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SFT2D2O95562 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 OXCT2P1-201ENST00000447263 1535 ntBASIC17.79■□□□□ 0.44
SFT2D2O95562 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.79■□□□□ 0.44
SFT2D2O95562 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.79■□□□□ 0.44
SFT2D2O95562 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.79■□□□□ 0.44
SFT2D2O95562 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
SFT2D2O95562 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SFT2D2O95562 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.79■□□□□ 0.44
SFT2D2O95562 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SFT2D2O95562 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.78■□□□□ 0.44
SFT2D2O95562 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SFT2D2O95562 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SFT2D2O95562 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SFT2D2O95562 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SFT2D2O95562 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SFT2D2O95562 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SFT2D2O95562 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SFT2D2O95562 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SFT2D2O95562 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SFT2D2O95562 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.77■□□□□ 0.44
SFT2D2O95562 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SFT2D2O95562 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SFT2D2O95562 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.77■□□□□ 0.44
SFT2D2O95562 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SFT2D2O95562 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SFT2D2O95562 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SFT2D2O95562 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SFT2D2O95562 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SFT2D2O95562 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
SFT2D2O95562 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.76■□□□□ 0.43
SFT2D2O95562 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SFT2D2O95562 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SFT2D2O95562 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SFT2D2O95562 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SFT2D2O95562 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SFT2D2O95562 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.76■□□□□ 0.43
SFT2D2O95562 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.76■□□□□ 0.43
SFT2D2O95562 U85056.1-201ENST00000616429 682 ntBASIC17.76■□□□□ 0.43
SFT2D2O95562 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SFT2D2O95562 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SFT2D2O95562 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SFT2D2O95562 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.76■□□□□ 0.43
SFT2D2O95562 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.76■□□□□ 0.43
SFT2D2O95562 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SFT2D2O95562 AC026471.6-201ENST00000622954 1905 ntBASIC17.75■□□□□ 0.43
SFT2D2O95562 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SFT2D2O95562 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SFT2D2O95562 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SFT2D2O95562 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SFT2D2O95562 AC005703.6-201ENST00000623265 1329 ntBASIC17.74■□□□□ 0.43
SFT2D2O95562 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SFT2D2O95562 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 AC007952.6-201ENST00000573168 2673 ntBASIC17.74■□□□□ 0.43
SFT2D2O95562 AC003957.1-201ENST00000625108 2673 ntBASIC17.74■□□□□ 0.43
SFT2D2O95562 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.74■□□□□ 0.43
SFT2D2O95562 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SFT2D2O95562 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms