Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SIX6O95475 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.95■□□□□ 0.46
SIX6O95475 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 AC016575.1-201ENST00000607026 382 ntBASIC17.95■□□□□ 0.46
SIX6O95475 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SIX6O95475 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.95■□□□□ 0.46
SIX6O95475 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX6O95475 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX6O95475 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX6O95475 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX6O95475 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIX6O95475 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.94■□□□□ 0.46
SIX6O95475 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX6O95475 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIX6O95475 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX6O95475 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX6O95475 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 AC022413.1-201ENST00000624602 984 ntBASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
SIX6O95475 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SIX6O95475 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SIX6O95475 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX6O95475 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX6O95475 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX6O95475 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX6O95475 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX6O95475 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX6O95475 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIX6O95475 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIX6O95475 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX6O95475 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SIX6O95475 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.91■□□□□ 0.46
SIX6O95475 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIX6O95475 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.91■□□□□ 0.46
SIX6O95475 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX6O95475 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX6O95475 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.91■□□□□ 0.46
SIX6O95475 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SIX6O95475 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX6O95475 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX6O95475 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX6O95475 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.9■□□□□ 0.46
SIX6O95475 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX6O95475 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX6O95475 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX6O95475 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SIX6O95475 AL020996.1-203ENST00000536896 2307 ntBASIC17.89■□□□□ 0.46
SIX6O95475 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms