Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 IKBKGP1-201ENST00000612193 1073 ntBASIC25.73■■□□□ 1.71
MBD4O95243 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.73■■□□□ 1.71
MBD4O95243 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MBD4O95243 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
MBD4O95243 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.72■■□□□ 1.71
MBD4O95243 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.72■■□□□ 1.71
MBD4O95243 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.72■■□□□ 1.71
MBD4O95243 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.72■■□□□ 1.71
MBD4O95243 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.72■■□□□ 1.71
MBD4O95243 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
MBD4O95243 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 AP006587.3-201ENST00000525742 1516 ntBASIC25.72■■□□□ 1.71
MBD4O95243 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MBD4O95243 AC233723.2-201ENST00000623798 2106 ntBASIC25.72■■□□□ 1.71
MBD4O95243 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.71■■□□□ 1.71
MBD4O95243 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MBD4O95243 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MBD4O95243 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MBD4O95243 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MBD4O95243 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.71■■□□□ 1.71
MBD4O95243 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.71■■□□□ 1.71
MBD4O95243 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.71■■□□□ 1.71
MBD4O95243 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.71■■□□□ 1.71
MBD4O95243 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.71■■□□□ 1.71
MBD4O95243 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.71■■□□□ 1.71
MBD4O95243 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MBD4O95243 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.71■■□□□ 1.71
MBD4O95243 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.71■■□□□ 1.71
MBD4O95243 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.71■■□□□ 1.71
MBD4O95243 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MBD4O95243 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
MBD4O95243 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.7■■□□□ 1.7
MBD4O95243 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MBD4O95243 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.7■■□□□ 1.7
MBD4O95243 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
MBD4O95243 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.69■■□□□ 1.7
MBD4O95243 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.69■■□□□ 1.7
MBD4O95243 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.69■■□□□ 1.7
MBD4O95243 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.69■■□□□ 1.7
MBD4O95243 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
MBD4O95243 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.68■■□□□ 1.7
MBD4O95243 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.68■■□□□ 1.7
MBD4O95243 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
MBD4O95243 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
MBD4O95243 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.68■■□□□ 1.7
MBD4O95243 AC092437.1-201ENST00000624794 1048 ntBASIC25.68■■□□□ 1.7
MBD4O95243 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
MBD4O95243 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 KRT87P-202ENST00000534226 1464 ntBASIC25.67■■□□□ 1.7
MBD4O95243 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.67■■□□□ 1.7
MBD4O95243 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
MBD4O95243 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.67■■□□□ 1.7
MBD4O95243 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.67■■□□□ 1.7
MBD4O95243 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.67■■□□□ 1.7
MBD4O95243 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.67■■□□□ 1.7
MBD4O95243 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MBD4O95243 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.66■■□□□ 1.7
MBD4O95243 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 GUSBP5-202ENST00000510805 1989 ntBASIC25.66■■□□□ 1.7
MBD4O95243 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.66■■□□□ 1.7
MBD4O95243 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.66■■□□□ 1.7
MBD4O95243 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
MBD4O95243 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MBD4O95243 AC092053.2-201ENST00000640557 1818 ntBASIC25.65■■□□□ 1.7
MBD4O95243 AC133561.1-201ENST00000568600 2415 ntBASIC25.65■■□□□ 1.7
MBD4O95243 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.65■■□□□ 1.7
MBD4O95243 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.65■■□□□ 1.7
MBD4O95243 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.65■■□□□ 1.7
MBD4O95243 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.65■■□□□ 1.7
MBD4O95243 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.65■■□□□ 1.7
MBD4O95243 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms