Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KDM4BO94953 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KDM4BO94953 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KDM4BO94953 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.74■□□□□ 0.59
KDM4BO94953 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
KDM4BO94953 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KDM4BO94953 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.74■□□□□ 0.59
KDM4BO94953 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 C17orf82-201ENST00000623772 1530 ntBASIC18.74■□□□□ 0.59
KDM4BO94953 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KDM4BO94953 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
KDM4BO94953 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.73■□□□□ 0.59
KDM4BO94953 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
KDM4BO94953 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KDM4BO94953 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.73■□□□□ 0.59
KDM4BO94953 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.73■□□□□ 0.59
KDM4BO94953 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.73■□□□□ 0.59
KDM4BO94953 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KDM4BO94953 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.72■□□□□ 0.59
KDM4BO94953 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
KDM4BO94953 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.72■□□□□ 0.59
KDM4BO94953 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KDM4BO94953 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KDM4BO94953 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDM4BO94953 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.71■□□□□ 0.59
KDM4BO94953 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 MIR6724-1-201ENST00000616420 92 ntBASIC18.71■□□□□ 0.59
KDM4BO94953 MIR6724-2-201ENST00000616483 92 ntBASIC18.71■□□□□ 0.59
KDM4BO94953 MIR6724-4-201ENST00000617390 92 ntBASIC18.71■□□□□ 0.59
KDM4BO94953 MIR6724-3-201ENST00000622482 92 ntBASIC18.71■□□□□ 0.59
KDM4BO94953 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDM4BO94953 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KDM4BO94953 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.71■□□□□ 0.59
KDM4BO94953 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KDM4BO94953 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.71■□□□□ 0.58
KDM4BO94953 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
KDM4BO94953 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
KDM4BO94953 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.7■□□□□ 0.58
KDM4BO94953 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
KDM4BO94953 UNC93B8-201ENST00000511903 705 ntBASIC18.7■□□□□ 0.58
KDM4BO94953 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KDM4BO94953 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
KDM4BO94953 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms