Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.82■■■□□ 2.2
LTN1O94822 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC28.82■■■□□ 2.2
LTN1O94822 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 MARS-234ENST00000630571 216 ntTSL 5 BASIC28.82■■■□□ 2.2
LTN1O94822 MARS-235ENST00000630803 183 ntTSL 3 BASIC28.82■■■□□ 2.2
LTN1O94822 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LTN1O94822 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
LTN1O94822 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LTN1O94822 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LTN1O94822 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LTN1O94822 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.81■■■□□ 2.2
LTN1O94822 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
LTN1O94822 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.8■■■□□ 2.2
LTN1O94822 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
LTN1O94822 AC068338.2-201ENST00000563278 1430 ntBASIC28.8■■■□□ 2.2
LTN1O94822 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
LTN1O94822 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
LTN1O94822 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.8■■■□□ 2.2
LTN1O94822 TSPY20P-201ENST00000450910 630 ntBASIC28.8■■■□□ 2.2
LTN1O94822 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
LTN1O94822 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.8■■■□□ 2.2
LTN1O94822 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.79■■■□□ 2.2
LTN1O94822 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LTN1O94822 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LTN1O94822 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.79■■■□□ 2.2
LTN1O94822 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.79■■■□□ 2.2
LTN1O94822 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
LTN1O94822 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.78■■■□□ 2.2
LTN1O94822 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.78■■■□□ 2.2
LTN1O94822 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
LTN1O94822 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.78■■■□□ 2.2
LTN1O94822 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
LTN1O94822 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
LTN1O94822 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
LTN1O94822 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
LTN1O94822 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
LTN1O94822 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.77■■■□□ 2.2
LTN1O94822 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
LTN1O94822 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
LTN1O94822 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.76■■■□□ 2.2
LTN1O94822 AC073210.2-201ENST00000430369 194 ntBASIC28.76■■■□□ 2.19
LTN1O94822 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
LTN1O94822 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
LTN1O94822 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
LTN1O94822 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
LTN1O94822 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
LTN1O94822 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
LTN1O94822 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.75■■■□□ 2.19
LTN1O94822 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
LTN1O94822 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.75■■■□□ 2.19
LTN1O94822 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
LTN1O94822 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
LTN1O94822 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.75■■■□□ 2.19
LTN1O94822 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
LTN1O94822 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.75■■■□□ 2.19
LTN1O94822 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
LTN1O94822 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.74■■■□□ 2.19
LTN1O94822 AC105036.2-201ENST00000569468 176 ntBASIC28.74■■■□□ 2.19
LTN1O94822 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.74■■■□□ 2.19
LTN1O94822 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LTN1O94822 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.74■■■□□ 2.19
LTN1O94822 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LTN1O94822 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
LTN1O94822 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
LTN1O94822 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
LTN1O94822 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.73■■■□□ 2.19
LTN1O94822 TMEM191A-211ENST00000637163 1067 ntBASIC28.73■■■□□ 2.19
LTN1O94822 AC066615.1-201ENST00000640911 628 ntBASIC28.73■■■□□ 2.19
LTN1O94822 MKRN4P-201ENST00000444706 1521 ntBASIC28.73■■■□□ 2.19
LTN1O94822 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
LTN1O94822 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
LTN1O94822 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.73■■■□□ 2.19
LTN1O94822 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
LTN1O94822 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 BET1L-204ENST00000410108 637 ntTSL 3 BASIC28.72■■■□□ 2.19
LTN1O94822 AC016405.3-201ENST00000607710 860 ntBASIC28.72■■■□□ 2.19
LTN1O94822 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.72■■■□□ 2.19
LTN1O94822 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms