Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP200O75643 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP200O75643 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP200O75643 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.63■□□□□ 0.89
SNRNP200O75643 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRNP200O75643 AC242852.2-201ENST00000615738 1807 ntBASIC20.63■□□□□ 0.89
SNRNP200O75643 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
SNRNP200O75643 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.63■□□□□ 0.89
SNRNP200O75643 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.63■□□□□ 0.89
SNRNP200O75643 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRNP200O75643 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP200O75643 AC004854.2-201ENST00000608450 1441 ntBASIC20.63■□□□□ 0.89
SNRNP200O75643 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRNP200O75643 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SNRNP200O75643 AC016769.1-201ENST00000409132 1010 ntBASIC20.62■□□□□ 0.89
SNRNP200O75643 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRNP200O75643 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.62■□□□□ 0.89
SNRNP200O75643 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.62■□□□□ 0.89
SNRNP200O75643 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SNRNP200O75643 AP004607.4-201ENST00000530158 1459 ntBASIC20.61■□□□□ 0.89
SNRNP200O75643 KRT87P-202ENST00000534226 1464 ntBASIC20.61■□□□□ 0.89
SNRNP200O75643 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SNRNP200O75643 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SNRNP200O75643 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRNP200O75643 EP400NL-214ENST00000641289 2402 ntBASIC20.61■□□□□ 0.89
SNRNP200O75643 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SNRNP200O75643 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.6■□□□□ 0.89
SNRNP200O75643 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SNRNP200O75643 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SNRNP200O75643 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.6■□□□□ 0.89
SNRNP200O75643 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.6■□□□□ 0.89
SNRNP200O75643 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.6■□□□□ 0.89
SNRNP200O75643 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.6■□□□□ 0.89
SNRNP200O75643 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.6■□□□□ 0.89
SNRNP200O75643 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.6■□□□□ 0.89
SNRNP200O75643 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SNRNP200O75643 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNRNP200O75643 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNRNP200O75643 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.59■□□□□ 0.89
SNRNP200O75643 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.59■□□□□ 0.89
SNRNP200O75643 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.59■□□□□ 0.89
SNRNP200O75643 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRNP200O75643 AC092437.1-201ENST00000624794 1048 ntBASIC20.59■□□□□ 0.89
SNRNP200O75643 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNRNP200O75643 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.89
SNRNP200O75643 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRNP200O75643 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNRNP200O75643 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNRNP200O75643 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNRNP200O75643 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.58■□□□□ 0.89
SNRNP200O75643 AC104187.1-201ENST00000607510 612 ntBASIC20.58■□□□□ 0.89
SNRNP200O75643 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
SNRNP200O75643 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.58■□□□□ 0.88
SNRNP200O75643 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
SNRNP200O75643 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms