Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L6-201ENST00000626483 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L1-201ENST00000627662 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L8-201ENST00000629013 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L3-201ENST00000630187 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L7-201ENST00000630678 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L5-201ENST00000630834 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
KDELR3O43731 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
KDELR3O43731 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KDELR3O43731 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
KDELR3O43731 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
KDELR3O43731 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.86■■□□□ 1.09
KDELR3O43731 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
KDELR3O43731 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.86■■□□□ 1.09
KDELR3O43731 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.86■■□□□ 1.09
KDELR3O43731 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.86■■□□□ 1.09
KDELR3O43731 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.86■■□□□ 1.09
KDELR3O43731 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.86■■□□□ 1.09
KDELR3O43731 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDELR3O43731 AP006587.3-201ENST00000525742 1516 ntBASIC21.85■■□□□ 1.09
KDELR3O43731 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
KDELR3O43731 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KDELR3O43731 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KDELR3O43731 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.85■■□□□ 1.09
KDELR3O43731 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.85■■□□□ 1.09
KDELR3O43731 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.85■■□□□ 1.09
KDELR3O43731 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KDELR3O43731 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.85■■□□□ 1.09
KDELR3O43731 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KDELR3O43731 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KDELR3O43731 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KDELR3O43731 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.84■■□□□ 1.09
KDELR3O43731 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KDELR3O43731 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.84■■□□□ 1.09
KDELR3O43731 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.84■■□□□ 1.09
KDELR3O43731 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDELR3O43731 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KDELR3O43731 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KDELR3O43731 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.83■■□□□ 1.09
KDELR3O43731 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
KDELR3O43731 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.83■■□□□ 1.09
KDELR3O43731 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KDELR3O43731 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.83■■□□□ 1.09
KDELR3O43731 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.83■■□□□ 1.09
KDELR3O43731 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.83■■□□□ 1.09
KDELR3O43731 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KDELR3O43731 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KDELR3O43731 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.83■■□□□ 1.08
KDELR3O43731 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
KDELR3O43731 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.82■■□□□ 1.08
KDELR3O43731 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
KDELR3O43731 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDELR3O43731 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.81■■□□□ 1.08
KDELR3O43731 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDELR3O43731 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.81■■□□□ 1.08
KDELR3O43731 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDELR3O43731 AC079140.4-201ENST00000507448 529 ntBASIC21.81■■□□□ 1.08
KDELR3O43731 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.81■■□□□ 1.08
KDELR3O43731 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.81■■□□□ 1.08
KDELR3O43731 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.81■■□□□ 1.08
KDELR3O43731 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDELR3O43731 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
KDELR3O43731 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDELR3O43731 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.81■■□□□ 1.08
KDELR3O43731 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDELR3O43731 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
KDELR3O43731 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.8■■□□□ 1.08
KDELR3O43731 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.8■■□□□ 1.08
KDELR3O43731 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
KDELR3O43731 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms