Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD9O15198 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMAD9O15198 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.4■□□□□ 0.7
SMAD9O15198 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.4■□□□□ 0.7
SMAD9O15198 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SMAD9O15198 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SMAD9O15198 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMAD9O15198 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMAD9O15198 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.39■□□□□ 0.69
SMAD9O15198 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 AC105233.4-201ENST00000642045 216 ntBASIC19.39■□□□□ 0.69
SMAD9O15198 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.39■□□□□ 0.69
SMAD9O15198 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SMAD9O15198 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SMAD9O15198 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.39■□□□□ 0.69
SMAD9O15198 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.39■□□□□ 0.69
SMAD9O15198 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMAD9O15198 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD9O15198 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD9O15198 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD9O15198 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD9O15198 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SMAD9O15198 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.37■□□□□ 0.69
SMAD9O15198 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD9O15198 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD9O15198 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.37■□□□□ 0.69
SMAD9O15198 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD9O15198 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SMAD9O15198 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD9O15198 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.37■□□□□ 0.69
SMAD9O15198 AC012414.1-201ENST00000556676 535 ntBASIC19.37■□□□□ 0.69
SMAD9O15198 SMUG1P1-201ENST00000590640 811 ntBASIC19.37■□□□□ 0.69
SMAD9O15198 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.37■□□□□ 0.69
SMAD9O15198 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD9O15198 AC139530.1-201ENST00000575312 1977 ntBASIC19.37■□□□□ 0.69
SMAD9O15198 AC080038.3-201ENST00000623346 1952 ntBASIC19.37■□□□□ 0.69
SMAD9O15198 LINC00526-201ENST00000581067 1875 ntBASIC19.37■□□□□ 0.69
SMAD9O15198 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMAD9O15198 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.36■□□□□ 0.69
SMAD9O15198 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD9O15198 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD9O15198 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD9O15198 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.36■□□□□ 0.69
SMAD9O15198 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.36■□□□□ 0.69
SMAD9O15198 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD9O15198 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.36■□□□□ 0.69
SMAD9O15198 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD9O15198 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMAD9O15198 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms