Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ATP2A1O14983 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.67■■□□□ 1.54
ATP2A1O14983 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
ATP2A1O14983 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
ATP2A1O14983 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ATP2A1O14983 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2A1O14983 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ATP2A1O14983 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2A1O14983 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2A1O14983 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2A1O14983 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ATP2A1O14983 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.66■■□□□ 1.54
ATP2A1O14983 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2A1O14983 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.66■■□□□ 1.54
ATP2A1O14983 AL109923.1-201ENST00000618799 583 ntBASIC24.66■■□□□ 1.54
ATP2A1O14983 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP2A1O14983 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.65■■□□□ 1.54
ATP2A1O14983 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.65■■□□□ 1.54
ATP2A1O14983 AC087742.1-201ENST00000575880 1738 ntBASIC24.65■■□□□ 1.54
ATP2A1O14983 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP2A1O14983 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2A1O14983 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2A1O14983 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2A1O14983 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2A1O14983 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.64■■□□□ 1.54
ATP2A1O14983 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.64■■□□□ 1.54
ATP2A1O14983 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2A1O14983 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2A1O14983 EEF1DP3-203ENST00000566025 782 ntBASIC24.64■■□□□ 1.54
ATP2A1O14983 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
ATP2A1O14983 AC137767.1-201ENST00000602918 1920 ntBASIC24.64■■□□□ 1.53
ATP2A1O14983 AP006587.3-201ENST00000525742 1516 ntBASIC24.64■■□□□ 1.53
ATP2A1O14983 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ATP2A1O14983 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2A1O14983 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ATP2A1O14983 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2A1O14983 GPX1P1-201ENST00000388829 606 ntBASIC24.63■■□□□ 1.53
ATP2A1O14983 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2A1O14983 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.63■■□□□ 1.53
ATP2A1O14983 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.63■■□□□ 1.53
ATP2A1O14983 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
ATP2A1O14983 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.63■■□□□ 1.53
ATP2A1O14983 AL050303.2-201ENST00000619798 666 ntBASIC24.63■■□□□ 1.53
ATP2A1O14983 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2A1O14983 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2A1O14983 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2A1O14983 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2A1O14983 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2A1O14983 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2A1O14983 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.62■■□□□ 1.53
ATP2A1O14983 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
ATP2A1O14983 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
ATP2A1O14983 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.62■■□□□ 1.53
ATP2A1O14983 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ATP2A1O14983 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
ATP2A1O14983 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 AC007322.1-201ENST00000426983 750 ntBASIC24.61■■□□□ 1.53
ATP2A1O14983 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.61■■□□□ 1.53
ATP2A1O14983 SLC7A5P1-201ENST00000568957 537 ntBASIC24.61■■□□□ 1.53
ATP2A1O14983 AC053503.5-201ENST00000601508 636 ntBASIC24.61■■□□□ 1.53
ATP2A1O14983 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.61■■□□□ 1.53
ATP2A1O14983 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP2A1O14983 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ATP2A1O14983 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ATP2A1O14983 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.6■■□□□ 1.53
ATP2A1O14983 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.6■■□□□ 1.53
ATP2A1O14983 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ATP2A1O14983 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
ATP2A1O14983 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ATP2A1O14983 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.6■■□□□ 1.53
ATP2A1O14983 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
ATP2A1O14983 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ATP2A1O14983 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.59■■□□□ 1.53
ATP2A1O14983 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.59■■□□□ 1.53
ATP2A1O14983 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP2A1O14983 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms