Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SOX1O00570 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
SOX1O00570 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SOX1O00570 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX1O00570 AC010980.2-201ENST00000587099 1412 ntBASIC23.23■■□□□ 1.31
SOX1O00570 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX1O00570 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SOX1O00570 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SOX1O00570 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOX1O00570 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOX1O00570 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOX1O00570 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.22■■□□□ 1.31
SOX1O00570 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SOX1O00570 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.22■■□□□ 1.31
SOX1O00570 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.22■■□□□ 1.31
SOX1O00570 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.22■■□□□ 1.31
SOX1O00570 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOX1O00570 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
SOX1O00570 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.22■■□□□ 1.31
SOX1O00570 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.22■■□□□ 1.31
SOX1O00570 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SOX1O00570 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.21■■□□□ 1.31
SOX1O00570 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
SOX1O00570 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOX1O00570 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOX1O00570 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOX1O00570 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SOX1O00570 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SOX1O00570 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.2■■□□□ 1.3
SOX1O00570 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SOX1O00570 RN7SL850P-201ENST00000579959 291 ntBASIC23.2■■□□□ 1.3
SOX1O00570 RN7SL471P-201ENST00000580476 299 ntBASIC23.2■■□□□ 1.3
SOX1O00570 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX1O00570 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SOX1O00570 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX1O00570 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SOX1O00570 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX1O00570 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.19■■□□□ 1.3
SOX1O00570 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SOX1O00570 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.19■■□□□ 1.3
SOX1O00570 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.19■■□□□ 1.3
SOX1O00570 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.19■■□□□ 1.3
SOX1O00570 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.19■■□□□ 1.3
SOX1O00570 AC233263.1-201ENST00000578059 224 ntBASIC23.19■■□□□ 1.3
SOX1O00570 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SOX1O00570 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SOX1O00570 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.19■■□□□ 1.3
SOX1O00570 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.18■■□□□ 1.3
SOX1O00570 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SOX1O00570 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SOX1O00570 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC23.18■■□□□ 1.3
SOX1O00570 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.18■■□□□ 1.3
SOX1O00570 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.18■■□□□ 1.3
SOX1O00570 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.18■■□□□ 1.3
SOX1O00570 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.18■■□□□ 1.3
SOX1O00570 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SOX1O00570 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SOX1O00570 AC092803.2-201ENST00000564287 1899 ntBASIC23.17■■□□□ 1.3
SOX1O00570 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.17■■□□□ 1.3
SOX1O00570 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SOX1O00570 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOX1O00570 AC055733.4-201ENST00000638462 1354 ntBASIC23.16■■□□□ 1.3
SOX1O00570 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOX1O00570 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.16■■□□□ 1.3
SOX1O00570 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.16■■□□□ 1.3
SOX1O00570 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SOX1O00570 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOX1O00570 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.16■■□□□ 1.3
SOX1O00570 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.16■■□□□ 1.3
SOX1O00570 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.16■■□□□ 1.3
SOX1O00570 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SOX1O00570 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOX1O00570 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.16■■□□□ 1.3
SOX1O00570 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX1O00570 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX1O00570 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
SOX1O00570 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX1O00570 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.15■■□□□ 1.3
SOX1O00570 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.15■■□□□ 1.3
SOX1O00570 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX1O00570 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.15■■□□□ 1.3
SOX1O00570 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX1O00570 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
SOX1O00570 KRT17P2-201ENST00000300992 1314 ntBASIC23.14■■□□□ 1.3
SOX1O00570 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
SOX1O00570 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SOX1O00570 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms