Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 AC010542.4-201ENST00000563151 1910 ntBASIC18.13■□□□□ 0.49
SIRPB1O00241 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.13■□□□□ 0.49
SIRPB1O00241 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIRPB1O00241 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SIRPB1O00241 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SIRPB1O00241 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.12■□□□□ 0.49
SIRPB1O00241 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.12■□□□□ 0.49
SIRPB1O00241 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.12■□□□□ 0.49
SIRPB1O00241 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIRPB1O00241 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.12■□□□□ 0.49
SIRPB1O00241 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SIRPB1O00241 AC007375.3-201ENST00000600936 2314 ntBASIC18.11■□□□□ 0.49
SIRPB1O00241 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIRPB1O00241 MIR4767-201ENST00000582827 78 ntBASIC18.11■□□□□ 0.49
SIRPB1O00241 AL136162.1-201ENST00000607711 1078 ntBASIC18.11■□□□□ 0.49
SIRPB1O00241 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.11■□□□□ 0.49
SIRPB1O00241 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIRPB1O00241 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SIRPB1O00241 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.11■□□□□ 0.49
SIRPB1O00241 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIRPB1O00241 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIRPB1O00241 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.11■□□□□ 0.49
SIRPB1O00241 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIRPB1O00241 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIRPB1O00241 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIRPB1O00241 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SIRPB1O00241 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIRPB1O00241 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.1■□□□□ 0.49
SIRPB1O00241 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.1■□□□□ 0.49
SIRPB1O00241 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SIRPB1O00241 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.1■□□□□ 0.49
SIRPB1O00241 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.1■□□□□ 0.49
SIRPB1O00241 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIRPB1O00241 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SIRPB1O00241 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIRPB1O00241 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIRPB1O00241 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIRPB1O00241 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIRPB1O00241 OXCT2P1-201ENST00000447263 1535 ntBASIC18.09■□□□□ 0.49
SIRPB1O00241 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
SIRPB1O00241 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
SIRPB1O00241 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIRPB1O00241 AC024257.2-201ENST00000549699 147 ntBASIC18.09■□□□□ 0.49
SIRPB1O00241 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.09■□□□□ 0.49
SIRPB1O00241 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.09■□□□□ 0.49
SIRPB1O00241 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.09■□□□□ 0.49
SIRPB1O00241 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIRPB1O00241 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.08■□□□□ 0.49
SIRPB1O00241 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SIRPB1O00241 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.08■□□□□ 0.48
SIRPB1O00241 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.08■□□□□ 0.48
SIRPB1O00241 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SIRPB1O00241 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIRPB1O00241 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SIRPB1O00241 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SIRPB1O00241 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SIRPB1O00241 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.07■□□□□ 0.48
SIRPB1O00241 AC135279.3-201ENST00000610945 1311 ntBASIC18.07■□□□□ 0.48
SIRPB1O00241 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.07■□□□□ 0.48
SIRPB1O00241 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SIRPB1O00241 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.07■□□□□ 0.48
SIRPB1O00241 AC096631.2-201ENST00000436136 790 ntBASIC18.07■□□□□ 0.48
SIRPB1O00241 AP005435.1-201ENST00000529293 1178 ntBASIC18.07■□□□□ 0.48
SIRPB1O00241 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.07■□□□□ 0.48
SIRPB1O00241 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SIRPB1O00241 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIRPB1O00241 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SIRPB1O00241 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.06■□□□□ 0.48
SIRPB1O00241 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms