Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 AL157400.5-201ENST00000507624 621 ntBASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.58□□□□□ -0.23
TMEM256-PLSCR3K7ERE1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 AL592295.1-201ENST00000400984 884 ntBASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 DUX4L11-201ENST00000611504 1267 ntBASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 DUX4L12-201ENST00000614593 1267 ntBASIC13.56□□□□□ -0.24
TMEM256-PLSCR3K7ERE1 DUX4L14-201ENST00000621227 1267 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms